Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., efflux RND transporter periplasmic adaptor subunit from Parabacteroides merdae CL09T00C40

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 32/334 (9%)

Query: 56  KVGYQTFSATQTDKVIEL-YGRTAPDRQ-AKIGAEIAGRIAEVKIAKGQMVTKNQIIALI 113
           K  Y T   +  +K +   Y  T   RQ   I  +++G I  + + +G++V K Q++ +I
Sbjct: 34  KASYATMKVSTANKELTTPYSATIRGRQDIDIYPQVSGTIERLCVTEGEVVRKGQLLFVI 93

Query: 114 DKGDLDAQL-------ERAKAQLKVRQQEFNAASALKNKGL-------QGEVAFTNAAAA 159
           D+    A L       E AKA L   +  +N+   L  K +         E ++  A A 
Sbjct: 94  DQVPYKAALKTAQANVEVAKAALATAELNYNSTKELFAKKVVSAFNLKTSENSYLTAKAQ 153

Query: 160 LTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFV--GIGDPVASIIDLHKLVIEA 217
           L  A++     +  L  T+V++P DGVV  LP   G  V   I  P+ ++ D   + +  
Sbjct: 154 LAQAEAQEVNARNNLSYTEVKSPSDGVVGMLPYRAGALVSASIPQPLTTVSDNSNMYVYF 213

Query: 218 DVSERHI-----QHVQLEQAAR------IRFIDGT--QTQGKVRYISRLSSPATNTFAIE 264
            ++E  +     Q+  +++A +      ++  D +  + +GK+  IS +    T T  + 
Sbjct: 214 SMTENQLLAMSRQYKSMDEALKNMPEVSLKLNDQSIYEQKGKIESISGVIDRKTGTVGVR 273

Query: 265 VEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVK-FVPIQ 323
               N  + + +G S  V +    +  I I        ++  L  K + G+ V   + + 
Sbjct: 274 AVFPNESRLLHSGASGNVLIPQTYKDCIVIPQGATVRLQDKTLVYKVVDGKAVSTLITVA 333

Query: 324 LVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKV 357
            +   ++ + L GL    +I++ G G VR+G +V
Sbjct: 334 EINDGREYIVLDGLKVGEEIVSEGAGLVREGTQV 367