Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., putative secretion protein, HylD family from Phaeobacter inhibens DSM 17395

 Score =  184 bits (467), Expect = 4e-51
 Identities = 109/345 (31%), Positives = 188/345 (54%), Gaps = 9/345 (2%)

Query: 30  LALWLGLGDSNAEEPQTAMEI----QVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKI 85
           L +W+ +G      P TA +      +    V  +   A    +++   G + PDR A +
Sbjct: 113 LVIWMAVGLVWPAAPVTADDEAGTPSIEPVSVAVRLSQAAPVTRMLRAEGVSKPDRDATL 172

Query: 86  GAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNK 145
            AE++G +A V +AKG  V   Q++A +      A L RA+A L   +++   A+AL  +
Sbjct: 173 RAEMSGHVASVAVAKGAQVEAGQLLASLQPAQRTASLARAEASLLRAERDHTRAAALHQR 232

Query: 146 GLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVA 205
           G   E   + A  AL  A++ L+  ++ L  T++ APF G +E   +  G +V  G  VA
Sbjct: 233 GSTTEQRLSEAREALAVAKADLAAARQSLAETRITAPFAGHLEEFDLTPGAYVQEGAAVA 292

Query: 206 SIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQTQGKVRYISRLSSPATNTFAIEV 265
            ++ L  L +   V +     ++    A++RF+DG   +G++ ++ + +   T +FA EV
Sbjct: 293 RVVALDPLRVSFQVPQHQRGALRAGAVAQVRFLDGDSAEGRLSFLGQSAQADTRSFAAEV 352

Query: 266 EVDNPQQA----IPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTL-QGEHVKFV 320
            +DNP  +    IPAG+SA + + L    A  ++PA+L+LD  G LG+K++   + V F 
Sbjct: 353 MLDNPSPSHAPPIPAGISARIAVPLDIVQAHFLSPALLSLDMAGVLGIKSVDDADRVVFT 412

Query: 321 PIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLATQLSAT 365
           P+++V++E+DGVW++GL +Q+ +IT GQGFV  G+ V   + +AT
Sbjct: 413 PVEIVQSERDGVWVSGLPDQLRLITVGQGFVTAGEVVRPREAAAT 457