Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 5/226 (2%)

Query: 75  GRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQ 134
           G   P ++    +E AGR+  + + +G  V+K Q++A +D   ++   E A+A  +   +
Sbjct: 63  GNFIPKQELNFLSENAGRVTAIYVDEGDRVSKGQVLARVDAEIINTDRETAEANYQNAVR 122

Query: 135 EFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEK 194
           +     +  + G   +     A  A  +A+  L   QR L +  +++P +G+V    IE 
Sbjct: 123 DEARYQSSFSTGGVTQQQLDQAKLATRNAKLRLQASQRRLSDANIKSPINGIVNKRYIEV 182

Query: 195 GDFVGI-GDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIR--FIDGTQTQGKVRYIS 251
           G FV   G  +  ++D+ KL ++ +V+E  + ++++     I+          GKV +I+
Sbjct: 183 GAFVNTQGTQLFELVDVSKLKLKVNVNESQVANLKIGDQIDIKSSVFPTDNFSGKVTFIA 242

Query: 252 RLSSPATNTFAIEVEVDNPQQ-AIPAGVSAEVELSLMSQAAIKITP 296
              + AT  F IE+EV+N Q+  + AG+          QA   + P
Sbjct: 243 A-KADATLNFPIEIEVENSQKNTLKAGMYGTAIFKFPKQAPSILIP 287