Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 5/276 (1%)

Query: 88  EIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGL 147
           E AGRIA +    G  V K  ++  +D    +A+L++AKA   +    F     L  K  
Sbjct: 88  ETAGRIASIGFKDGVPVAKGTVLVALDAATQEAELQQAKANHALAVTNFKRTEELLAKKF 147

Query: 148 QGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASI 207
             + +    AA L   +++++  +  L  T++RAPF GVV    +  GD+V  G  + ++
Sbjct: 148 ISQQSLDTTAANLKVQEAAVALAEAKLAKTRIRAPFAGVVGIREVSVGDYVKEGADLINL 207

Query: 208 IDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQTQ---GKVRYISRLSSPATNTFAIE 264
            D+  L ++  + E ++  +Q  QA  +  +D    Q     +  +  L        ++ 
Sbjct: 208 EDIRTLKLDFRLPELYLSRLQKGQAVEVS-VDALPNQAFKAVLDAVDPLVDANGRAISLR 266

Query: 265 VEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFVPIQL 324
             +DNP+  +  G+ A V L   ++  + + P    +   G   V  ++    K V ++ 
Sbjct: 267 ARLDNPELKLRPGMFARVRLLFGNRDGVLMIPEQAIVSGGGKQTVFRIEEGKAKKVEVKT 326

Query: 325 -VKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLA 359
            ++       L+GL     IIT GQ  V+DG  V A
Sbjct: 327 GLRRNAQVEILSGLAAGDRIITAGQLKVQDGSPVKA 362