Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score = 67.4 bits (163), Expect = 9e-16
 Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 38/305 (12%)

Query: 42  EEPQTAMEIQVP---LAKVGYQTFSAT--QTDKVIELYGRTAPD--RQAKIGAEIAGRIA 94
           +EP +A +I++    + K+G +T +AT    DKV+   GR  PD  R   I  +  G + 
Sbjct: 84  DEPASANQIKISTEKIQKLGVRTEAATLESLDKVVRAAGRIEPDERRTYAISPKYEGYVE 143

Query: 95  EVKI-AKGQMVTKNQIIALIDKGDL-DAQLERA--------------KAQLKVRQQEFNA 138
            + + A GQ V K Q +  +   +L  AQ E A               AQ  +RQ   ++
Sbjct: 144 RLYVNATGQAVGKGQPLFEVYSPELVSAQREYAIASQGLESMKSADDAAQSGMRQLADSS 203

Query: 139 ASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFV 198
            + L+N  +  E        +LT +  +  T+         R+P +G+V      +G   
Sbjct: 204 LTRLRNWDISEE-----QVKSLTKSGDAKRTLI-------FRSPVNGIVAEKKAVQGMRF 251

Query: 199 GIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQT--QGKVRYISRLSSP 256
             GD +  I DL  + + ADV E+ I  V+    A+++     +   +G V Y+      
Sbjct: 252 APGDVLYQITDLGTVWVIADVFEQDIGWVKSGAKAKVKINAYPEKTFEGTVSYVYPTLKA 311

Query: 257 ATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEH 316
            T T  + +E+ NP   +  G+ A+VEL  +++ A+   P    +D  G   +  +Q + 
Sbjct: 312 DTRTIPVRLELPNPGNLLKPGMFAQVELPTIAKGAVVTIPNSAVID-SGTRQIVLIQAKE 370

Query: 317 VKFVP 321
            +F P
Sbjct: 371 GRFEP 375