Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., auxiliary transporter membrane fusion protein from Klebsiella michiganensis M5al

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 28/199 (14%)

Query: 82  QAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKG-------DLDAQLERAKAQLKVRQ- 133
           Q  +  +++G I ++ +   Q+V   +++  ID         +  AQL +AKA++   Q 
Sbjct: 42  QVGVTPQVSGSILQLNVRDNQLVKAGEVLFRIDDTPYKIALLNARAQLAKAKAEVARAQA 101

Query: 134 ----------------QEFNAASALKNKGLQGEVAFTN---AAAALTDAQSSLSTVQRLL 174
                           Q F +A  L+N       A TN   A A +  AQ++L   Q  L
Sbjct: 102 EQKKAASDANRRRHLSQNFISAEDLENANTALNTATTNLEAAKAVVGVAQATLDHAQWQL 161

Query: 175 DNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAAR 234
             T+++AP DG V  L    GD+  +G PV +++D H   +     E  ++H++   +A+
Sbjct: 162 TQTEIKAPVDGWVTNLSTRVGDYAAVGHPVFALVDSHSFYVVGYFEETKLRHIRPGDSAQ 221

Query: 235 IRFIDGTQ-TQGKVRYISR 252
           I      Q  QG V  I R
Sbjct: 222 IILYSSKQKLQGHVGSIGR 240