Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., HlyD family secretion protein from Dyella japonica UNC79MFTsu3.2

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 16/171 (9%)

Query: 87  AEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASAL---- 142
           A  A R A+ ++A  Q   + ++      GD+ +Q  RA AQ        NAA A     
Sbjct: 111 ASAAARKADYEMASSQAQRRQRL------GDVVSQEVRADAQSSA-----NAARATWQQA 159

Query: 143 KNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGD 202
           +  G Q   +   A AA+  AQ +L   +  L+ T+VRAP DG V  L I  GD+   G 
Sbjct: 160 QASGSQASASRQQAEAAVEQAQVALDRARLDLERTEVRAPVDGYVTNLDIRVGDYAATGS 219

Query: 203 PVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFI-DGTQTQGKVRYISR 252
           P  ++ID H   I     E  + H+++     IR +  G   +G++  I+R
Sbjct: 220 PRLALIDSHSYYIYGYFEETKLPHLRVGDPVNIRLMAGGAHLKGQIIGIAR 270