Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 13/338 (3%)

Query: 28  ILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGA 87
           +LLA  L       E    A    V  A+V     +   T       G     R+  +  
Sbjct: 16  LLLAATLSACGGKTETDAPAPPTPVEAARVAAPDAAGAVTGA-----GALERRREMALSF 70

Query: 88  EIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGL 147
            I G +  +KI  G  V   Q+IA ID   +DA+ ++ +A L+  +++      L  KG 
Sbjct: 71  RIPGVLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGY 130

Query: 148 QGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASI 207
                  +  +AL  AQ++            + +P  GVV     + G+ VG G  VA +
Sbjct: 131 VSRQRIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQAGEVVGAGQVVARV 190

Query: 208 IDL-HKLVIEADVSERHIQHVQLEQAARIRF--IDGTQTQGKVRYISRLSSPATNTFAIE 264
            DL   LV+   ++ R    +++   A ++   I  T   G+V  +   +   T    +E
Sbjct: 191 ADLTSPLVLRLPLAARDAARIRVGDPATVKVDEIGETALNGRVTRVGEAADARTGAVLVE 250

Query: 265 VEVDNPQQAIPAGVSAEVELSLMSQAAIKIT----PAMLALDEEGNLG-VKTLQGEHVKF 319
           +E+  P   + +G  A   L++ +   +  T    PA   L+  G    V  + G   + 
Sbjct: 251 IELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVLEANGQRAFVFRVDGGKARR 310

Query: 320 VPIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKV 357
             +     + D   ++GL     +IT G GFV DG+ V
Sbjct: 311 TAVGFGGFDGDDALVSGLPNGAQVITAGAGFVSDGEAV 348