Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia sp. UNC404CL21Col

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 24/299 (8%)

Query: 55  AKVGYQTFSATQTDKVIELYG--RTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIAL 112
           AK+G  T  A      + L G  R   DR A +   +AG   +V +  GQ VT+ Q++A+
Sbjct: 69  AKIGVDTAGAADLRTQVVLPGEIRLNEDRTAHVVPRVAGVAEKVAVELGQPVTRGQLLAV 128

Query: 113 IDK---GDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLST 169
           +      D  ++L+ A+ +L + Q+       L  +G+  E  +  A  +L +A+ +   
Sbjct: 129 LSSPALSDQRSELQAAQQRLALAQETHAREKRLWEQGIAAEQDYQQARTSLQEARIAADN 188

Query: 170 VQR------------LLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEA 217
            ++             L+  ++RAPFDGVV    + +G+ V     V ++ DL  +  + 
Sbjct: 189 ARQKLTAIGAAPAGSALNRFELRAPFDGVVVAKHLSQGEAVQAETAVFTVADLRTVWADF 248

Query: 218 DVSERHIQHVQLEQAARIR-FIDGTQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPA 276
            V+ + ++ V    AA +R    GT  QGKV Y+  L    T T    V +DNP+ A   
Sbjct: 249 SVTAKDLEAVTTNAAATVRATATGTAVQGKVSYVGTLLGEQTRTAPARVTLDNPKLAWRP 308

Query: 277 G--VSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVW 333
           G  V+  VE   +         A+  +DE+ ++ V    G  V+  P++      DG W
Sbjct: 309 GMFVNVSVESGRVQVPVAVRADAVQTVDEKPSVFVPVPAGFEVR--PVK--TGRTDGTW 363