Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., RND family efflux transporter, MFP subunit from Paraburkholderia bryophila 376MFSha3.1

 Score = 97.1 bits (240), Expect = 8e-25
 Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 25/348 (7%)

Query: 27  IILLALWLGLGDSNAEEPQTAMEIQ---VPLAKVGYQTFSATQTDKVIELYGRTAPDRQA 83
           +++LA+ +       E P T  +     +  +     T S     + + L G      QA
Sbjct: 16  VVILAIAIAQAIRKRETPATTADTASSVIEFSPDDLTTVSRRSLVQTLPLTGSLRAVTQA 75

Query: 84  KIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQ-------LKVRQQEF 136
            + +++AG   EV + +G  V   QI+A ID  D  A+ E+++ Q       L + +Q  
Sbjct: 76  AVKSKVAGSALEVAVREGDAVQSGQILAKIDARDYVARAEQSRGQMAAMVGQLDIARQTL 135

Query: 137 NAASALKNKGLQGEVAFTNAA-------AALTDAQSSLSTVQRLLDNTQVRAPFDGVVET 189
                L  KG   + AF  A        A L  A+++L++    L +T VR+P +G + +
Sbjct: 136 ENNRVLVEKGFISKNAFDTAQSQYEIARANLDAARAALASSNLSLADTVVRSPLNGQIAS 195

Query: 190 LPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRF--IDGTQTQGKV 247
             +E G+ V +   +  ++DL  L +EA V    I  V++ Q  +I F  IDG   QG +
Sbjct: 196 RSVEPGEKVAVDTKLFDVVDLRTLELEAPVPVGEIGRVRIGQPVQIMFDGIDG-PVQGAI 254

Query: 248 RYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNL 307
             I+  + P + +  + V V NP   +  G+     +S+ S+  +   PA     +    
Sbjct: 255 TRINPAAQPGSRSIMVYVRVANPSGTLRVGMFGTGTISVGSRENVLAVPATAVRTDAARH 314

Query: 308 GVKTLQGEHVKFVPIQL-VKAEQD-GVWLTGLGEQVDIITRGQGFVRD 353
            V  L G  +   P+Q  +  + D G W   +G     +T GQ  V++
Sbjct: 315 SVYALVGGKLVEQPVQTGITGDADGGTWTEIVGGP---LTPGQQIVKN 359