Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  168 bits (425), Expect = 2e-46
 Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 33/355 (9%)

Query: 11  HRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCV 70
           ++  ++ L+   +A  W++ P+  ++  A I+ ++  P+    + K   H N+ +  +  
Sbjct: 8   NKAQMLLLVLVTIAFIWILLPFYGAVFWAVILGIVFAPMQRRLQLKFGWHRNVTSLFTLS 67

Query: 71  VLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFE 130
           +  V  ++P++ I   +VQ+G+     LY  +  G              L +A++   F+
Sbjct: 68  ICVVSAILPVIIISTLLVQEGAA----LYKSLESGE-------------LDIADYLARFK 110

Query: 131 EISPQQIAQRIGQF--------------ATTFGSNLVSISAKILGDAT-SFVMHFFLMLF 175
           +  P      + +F              +   GS   +  A   G  T  F++ FF+M++
Sbjct: 111 DALPPYFQHLLDRFGLGNLNGLRDKIVRSAMQGSEFFATQAFSFGQGTFQFMVSFFVMIY 170

Query: 176 VLFFLLRDHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGM 235
           +LFF LRD  +++  +R  +PL+  Q+ RL  +   V ++ V G+ L AI+QG  GG+  
Sbjct: 171 LLFFFLRDGAELVRKVRMAIPLAEHQKRRLQLKFNRVVRATVKGNLLVAISQGALGGLIF 230

Query: 236 WLAGFPGLF-WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSI 294
           W+ G   +  W  +M F S +P VG  L+W P  +Y  L+G     + L ++ V V+G +
Sbjct: 231 WVLGISTVLPWAVLMAFLSLLPAVGAGLVWAPVAVYFLLSGAIWQGVVLTLFGVFVIGLV 290

Query: 295 DNLLRPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEE 349
           DN LRP L+     M   M+  S LGG+ +FGL G + GPLI A+ M  + ++ E
Sbjct: 291 DNFLRPILVGKDTKMPDYMVLVSTLGGLAVFGLNGFVIGPLIAALFMSSWALFVE 345