Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 73/338 (21%), Positives = 150/338 (44%), Gaps = 20/338 (5%)

Query: 4   KIKLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEK-KLPSHNN 62
           +I L +   +L+V L +  L   W +   I  ++ A +++  + PI +  E+ +LP    
Sbjct: 7   RISLTTDSLLLIVGL-SLILLMLWQLRGLILILMSAIVLAASIAPIVNQLEQWRLPRW-- 63

Query: 63  LAAFLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSL 122
           L   ++   L  I+    L +   ++ Q     + L   V +  + ++     + + L L
Sbjct: 64  LGVLVAYGGLLAILTGASLLVGPLVISQIQTLLRQLPNLVERVELLSID----IAEQLDL 119

Query: 123 ANHYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLR 182
            +  L  + ++PQ++A  +   +         I+  ILG   S V    L L +  +L+ 
Sbjct: 120 QDSPLLPQLVNPQEVAGWVINTSQQLLRQSYGITRGILGGFFSVV----LGLLLSSYLVA 175

Query: 183 DHDKIISAIRHILPLSRSQEDRLLSEIENVSK---SAVMGSFLTAIAQGVAGGIGMWLAG 239
           D   +      +   +   +DRL + +  V +   + + G  L ++  G+A  +G+   G
Sbjct: 176 DSKTLGRGFVRLF--AAPWDDRLAALLGPVGQRMGAYIRGRVLVSLLLGIAIALGLRTLG 233

Query: 240 FP--GLFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDN- 296
                +  G + GF + IP +G  L  IPA       GD+ W     +    ++ ++++ 
Sbjct: 234 LGDYAIGLGAIAGFTNLIPFLGPFLGAIPALFVALAQGDSAWLFLWVLLLFVIIQNLESY 293

Query: 297 LLRPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGP 334
           +L P L+  + G++ L    ++LGG+QL G++G +  P
Sbjct: 294 VLDPLLVGAAVGIHPLYQLLAVLGGVQLLGIVGAVIAP 331