Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 70/332 (21%), Positives = 147/332 (44%), Gaps = 29/332 (8%)

Query: 15  VVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEK-KLPSHNNLAAFLSCVVLT 73
           VV +LA   A   +V P++ S  +A I +    P+  W  + ++P       +L+ ++L 
Sbjct: 21  VVVILAGIKAASPIVVPFVLSAFIAVICN----PVISWMMRFRVPK------WLAVMLLM 70

Query: 74  VIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEEIS 133
             IV+  L++   +    ++FS+ L  +  Q     +    W+++ L   N  +  E++ 
Sbjct: 71  FFIVMLGLWLATLVGSSINEFSKQLPHYRDQ----LIQQFGWILEKLQTLNIRISKEQV- 125

Query: 134 PQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIRH 193
                      A       +S++  +L    + + + FL++  + F+L +   +   +  
Sbjct: 126 ----------LAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKVHL 175

Query: 194 ILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFWGTMMGFA 252
            L     +  ++   + +V++  V+ + L ++A G   GIG+   G    L W  +    
Sbjct: 176 ALDDPEMRLQQIDKFLHSVNQYMVIKT-LVSLATGAVVGIGLAAIGVDYALLWAVIAFLF 234

Query: 253 SFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTL 312
           ++IP +G+ +  IPA L  F+      A   A+  +     + N++ P  M    G++TL
Sbjct: 235 NYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVMGNVIEPKFMGRGLGLSTL 294

Query: 313 MIFFSLLGGIQLFGLIGLIYG-PLIFAITMVL 343
           ++F SL+    L G +G++   PL   + + L
Sbjct: 295 VVFLSLIFWGWLLGSVGMLLSVPLTMIVKIAL 326