Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Conserved membrane protein from Mycobacterium tuberculosis H37Rv

 Score =  122 bits (305), Expect = 2e-32
 Identities = 85/352 (24%), Positives = 167/352 (47%), Gaps = 12/352 (3%)

Query: 1   MSEKIKLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSH 60
           ++ +  L     + ++ L+A     Y+L   Y   I++A + + L  P+  WF K+    
Sbjct: 1   LNTEFTLTQKRALAILTLIALLFGAYFL-RNYFVLIVVAAVGAYLFTPLFKWFTKRF--- 56

Query: 61  NNLAAFLSCVVLTVI--IVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVK 118
            N     +C +L+ +  +V+P+  + G  + Q ++   ++  WV    +  L +   +++
Sbjct: 57  -NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDK--ILQ 113

Query: 119 GLSLANHYLPFEEISPQQIAQRIGQF--ATTFGSNLVSISAKILGDATSFVMHFFLMLFV 176
            ++     +PF  I+    A R      A   G  L+       G     +    + ++V
Sbjct: 114 FVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSLAGVITSAIIFVYV 173

Query: 177 LFFLLRDHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMW 236
              LL + +K+ + I  + PL     D  L ++ ++ +  V G F+ A  QGVAG   ++
Sbjct: 174 FVALLVNREKLRTLIGQLNPLGEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIY 233

Query: 237 LAGFP-GLFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSID 295
           +AGF  G F   ++  A  I  +G  ++ IP  + +   G+    IF+ +W + VV +ID
Sbjct: 234 IAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNID 293

Query: 296 NLLRPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIY 347
           N+LRP L+   A +N+ ++  S+  GI +FG  G+I GP++  + +   ++Y
Sbjct: 294 NVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVY 345