Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., AI-2E family transporter from Methanococcus maripaludis JJ

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 72/332 (21%), Positives = 148/332 (44%), Gaps = 23/332 (6%)

Query: 18  LLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIV 77
           ++ S  A  +++ P++  I +A  ++ +  P++D  + K             ++  + IV
Sbjct: 1   MVFSFFALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKF------GRTYGAIICLLGIV 54

Query: 78  IPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEEISPQQI 137
           IP L +   + +    F  +L        +  + N    ++ +   +   PF +I     
Sbjct: 55  IPSLLLVVLVAEDVVTFLLSLDIENIITKVTPILNDIGYLR-VDGPDVSKPFSDI----- 108

Query: 138 AQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIRHILPL 197
                    +    L++  A  +    S +M    + F+ F+ L+D DK+  +    +P 
Sbjct: 109 --------WSVSKPLLNSFASQISSIPSLLMKLLFLSFMTFYFLKDGDKLTDSFLIYVPD 160

Query: 198 SRSQEDRL-LSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPG-LFWGTMMGFASFI 255
            + +   L LSEI    K+  +G+ +T++  G+   IG WL G P  +  G + G  + +
Sbjct: 161 DKKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILNIL 220

Query: 256 PVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVG-SIDNLLRPFLMQGSAGMNTLMI 314
           PVVG   I++P T+Y  LTG+    I L ++ +  +  + D  +RP ++     ++  ++
Sbjct: 221 PVVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIVFLSLAPDFAIRPRVISKDGDLHPALV 280

Query: 315 FFSLLGGIQLFGLIGLIYGPLIFAITMVLFNI 346
             + L G  +FG+ GL  GP+I +    +  +
Sbjct: 281 LIAFLIGPLVFGIPGLAIGPIIVSTVYAIHKV 312