Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  116 bits (290), Expect = 1e-30
 Identities = 93/342 (27%), Positives = 151/342 (44%), Gaps = 21/342 (6%)

Query: 10  SHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPI----HDWFEKKLPSHNNLAA 65
           S R L++A  A+  A   L   ++ ++  A  ++    P+      W    + +    A 
Sbjct: 2   STRWLLLAAFAAGAA---LFSSFLKALFFAACLACAFRPLSRRLEAWRGPLVAAGLTTAL 58

Query: 66  FLSCVVLTVIIVIPLLF---IFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSL 122
              C+V+ V +V  L     + G  V  G + S     W T    Q L      V  +  
Sbjct: 59  AGMCLVIPVAVVGSLAAPQAVQGLAVLDGLRESN----WFTSPEAQQL------VDDIDA 108

Query: 123 ANHYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLR 182
               LP  E   + +A+       T     ++    + G A + V+  F++L ++F    
Sbjct: 109 RLRDLPGLEGGLRGLARNAAGILGTAARTALAGGVGLAGGALNAVLQGFIVLMLIFVFTA 168

Query: 183 DHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP- 241
               I      +LP+ R+  DR ++         + G  L A  QGV  GIG  +AG P 
Sbjct: 169 YARHIQRFALALLPMPRAMLDRCVTAFRGAVVGVLAGVVLVAAIQGVLCGIGFAVAGVPQ 228

Query: 242 GLFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPF 301
             FWG +    + IPVVGT  +WIPA  +L+  G TT AI L +WS  +V   DN+LRP 
Sbjct: 229 AAFWGFIAAMVAPIPVVGTMAVWIPACAWLWFAGKTTAAIGLVLWSAIIVSGSDNILRPI 288

Query: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVL 343
            ++        +IF +++ G+  FG +GL+ GP++ A+ + L
Sbjct: 289 FLKTGIEAPIALIFLAIICGLAAFGPMGLLLGPVLLALGLQL 330