Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  231 bits (588), Expect = 3e-65
 Identities = 118/344 (34%), Positives = 193/344 (56%), Gaps = 2/344 (0%)

Query: 14  LVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLT 73
           L   LL S    Y LV P++++II++ + S  ++P +      L      AA L    + 
Sbjct: 32  LFALLLLSLYLSYQLVAPFLHTIILSSVFSASIYPFYRRLTSYLGERPVPAALLVLAGVV 91

Query: 74  VIIVIPLL-FIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEEI 132
           +++VIP++ F+ G I Q  +  S         GG+  L N   +   ++     LPF + 
Sbjct: 92  ILVVIPVVVFVIGLIPQAVASVSAITRWLAGHGGLDGL-NDAALAPYIAWVRENLPFIDP 150

Query: 133 SPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIR 192
           +   +   + Q +   G  L+     +LG+      HF L+L  +FF+L+D   ++  +R
Sbjct: 151 AQLDVRSSLVQASRAAGQTLLQWGTYVLGNTLLLFGHFLLLLLCMFFMLKDGAWMVQRVR 210

Query: 193 HILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLFWGTMMGFA 252
           ++ PL   Q+DR++ E+  V +S ++G  L A+ QG+ GG+ +   G P LFWGT+M FA
Sbjct: 211 YLSPLRIDQQDRIILELRRVGRSVLVGGLLVAVIQGLLGGVALAAVGIPALFWGTLMAFA 270

Query: 253 SFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTL 312
           S +PVVGT L+W+PA  YL LT     A+FL++W   VV   D++LRP+ M+G  GM   
Sbjct: 271 SLVPVVGTGLVWVPAVCYLLLTSQWESALFLSLWCGIVVVGADSILRPYFMRGGVGMPVF 330

Query: 313 MIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLD 356
            IF S+LGG++ FG++G++ GPLI + T+V+ ++Y +E+R  LD
Sbjct: 331 FIFLSILGGVKAFGMLGILDGPLILSFTVVMLSLYGDEYRDILD 374