Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 81/345 (23%), Positives = 161/345 (46%), Gaps = 26/345 (7%)

Query: 18  LLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIV 77
           LLA A  CY +  P++N ++ A I++++++P H    K+L      AA L  V+  +I+V
Sbjct: 27  LLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLSDKQGRAATLLIVIGLMILV 86

Query: 78  IPLLFIFGAIV-QQGS---KFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEEIS 133
           +P + +  ++    GS   + +QN     T    +++ N P+V  G  + + +L      
Sbjct: 87  LPTIMMVSSMTDNMGSLVERVNQNTLEVPTPK--ESIANIPFV--GAKIYDFWLKASTDL 142

Query: 134 P---QQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISA 190
           P   + +   +G  A      L SISA +L    SF++   +M +        H    S+
Sbjct: 143 PSLVKSLQPHLGDAAKQVIHALASISASLLMSMFSFIIAGIMMAY-------GHAGAQSS 195

Query: 191 IRHILPLSRSQED-RLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP--GLFWGT 247
            R    ++  +   +L++   +  ++  +G    A  Q +  GI M  AG P  G+F+  
Sbjct: 196 ARIATRIAGPERGAKLVNICSSTIRAVALGVIGVAFIQALLIGIVMTFAGIPLVGIFF-- 253

Query: 248 MMGFASFIPVVGTALIWIPATLYLFLTGD--TTWAIFLAIWSVAVVGSIDNLLRPFLMQG 305
           ++     I  +   L+ +PA  Y+++ GD  T  +I   +  + + G++DN+L+P  +  
Sbjct: 254 ILVLILGIAQIPALLVTLPAIAYIWMAGDNGTVGSIIYTVLLI-LAGAVDNVLKPIFLGR 312

Query: 306 SAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEE 350
                  ++    LGG+   G++G+  G  + +I   +F ++ +E
Sbjct: 313 GVDAPMPVVLIGALGGMATSGILGMFIGATLLSIGYRIFMMWVDE 357