Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 73.6 bits (179), Expect = 8e-18
 Identities = 73/343 (21%), Positives = 155/343 (45%), Gaps = 26/343 (7%)

Query: 14  LVVALLASALACYW---LVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCV 70
           L+  L+  AL  Y+   L+ P + ++++AF   LL +P+      KL  +    A L  V
Sbjct: 21  LLAILVGLALVLYFAGGLLAPLLVALVLAF---LLEWPVAQML--KLGINRTTGASLVLV 75

Query: 71  VLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFE 130
           +   I+V+    +  ++ +QG     +L + + +G +Q L           LA  Y  F 
Sbjct: 76  LFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKG-LQTL---------QGLATQYPQF- 124

Query: 131 EISPQQIAQRIGQFATTFGS-NLVSISAKILGDATSFVM---HFFLMLFVLFFLLRDHDK 186
            +S +Q+   + +      + +L+ I+ +++G + S ++   +  L+  ++FF L+D D+
Sbjct: 125 -VSSEQLNLMVAELKKLLDTQHLLDIAKQLIGYSASLLVLMVYAILVPLLVFFFLKDKDQ 183

Query: 187 IISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFW 245
           +IS  +   P +R    ++  E+     + + G  +  +  GVA  I     G       
Sbjct: 184 LISGSKRFFPTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYSALL 243

Query: 246 GTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSID-NLLRPFLMQ 304
           G + G +  IP VG  L+ +P  L  F     +      +    ++ ++D N+L P L  
Sbjct: 244 GVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFS 303

Query: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIY 347
            +  ++ ++I  ++L    L+G+ G+ +   + ++   + N +
Sbjct: 304 DAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAW 346