Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 33/334 (9%)

Query: 15  VVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTV 74
           VV +LA   A   +V P++ S  +A I +  +          L +   +  +L+ ++L  
Sbjct: 20  VVIILAGIKAASPIVVPFVLSSFIAVICNPAI---------GLMTKYRVPKWLAVILLMG 70

Query: 75  IIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEEISP 134
            IV+  L++   +    ++FS+ L     Q   Q +    WV+  L   N      +IS 
Sbjct: 71  FIVLMGLWLASLVGSSINEFSKQL----PQYRDQLVEQFSWVLHKLQALNI-----QISK 121

Query: 135 QQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIRHI 194
           +Q+       A       +S++  +L    + + + FL++  + F+L +   +   +   
Sbjct: 122 EQV------LAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLA 175

Query: 195 L--PLSRSQE-DRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFWGTMMG 250
           L  P  R Q+ DR L   ++V++  V+ + L ++A G+  G+G+ + G    L W  +  
Sbjct: 176 LDDPDMRLQQIDRFL---QSVNQYMVIKT-LVSLATGLIVGVGLAVIGVDYALLWAVIAF 231

Query: 251 FASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMN 310
             ++IP +G+ +  IPA L  F+      A   A+  VA    + NL+ P  M    G++
Sbjct: 232 LFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGLS 291

Query: 311 TLMIFFSLLGGIQLFGLIGLIYG-PLIFAITMVL 343
           TL++F SL+    L G +G++   PL   + + L
Sbjct: 292 TLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIAL 325