Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

 Score =  196 bits (498), Expect = 7e-55
 Identities = 123/334 (36%), Positives = 178/334 (53%), Gaps = 8/334 (2%)

Query: 8   SEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAYPEITRYF 67
           SE+ LRQ + F  + +L+AG   D    +L     +   +  H G  + L A      +F
Sbjct: 5   SEVLLRQAELFQGE-LLLAGLPAD----DLLGKLPNAHGWCWHAGDQAALDARFAERSHF 59

Query: 68  GEQLTADLNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAA 127
           G    +    +  +++ PK+K   +Y+L  L ++L  G E+ +VGE RSG++   K  + 
Sbjct: 60  GVNAPSR-EFETAVVFLPKSKDLTDYILNALASRLA-GRELYLVGEKRSGIEGAAKQLSP 117

Query: 128 YGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFD 187
           +G   K DSAR C  +     + P A  +E   + Y +      L + SLPGVFSHG  D
Sbjct: 118 FGKPRKLDSARHCQLWQVTVANAPEAKSLESLAQEYELPLAEGPLKVISLPGVFSHGRLD 177

Query: 188 LGSRLLLDTLPPL-SGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVA 246
            GS LLL+ L  L SG ++D G GAGVLG  + +  PH  + + D+ A A  SS+ TL A
Sbjct: 178 RGSALLLEHLDKLPSGHLLDFGCGAGVLGAAVKRRYPHNTVTLLDVDAFAAASSRLTLAA 237

Query: 247 NQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVV 306
           N L   V   D         + I++NPPFH G+ T Y ATE LL ++  HL +GG + +V
Sbjct: 238 NGLEAEVLTGDGIDAAPMGLSAILSNPPFHVGVHTDYHATENLLRKAAKHLKNGGELRLV 297

Query: 307 ANSFLKYPPILEQAFGHCDIAAKTNKFAIYHAKK 340
           ANSFLKY P++E+  G C I A+   F IY AK+
Sbjct: 298 ANSFLKYQPLIEEHLGVCAIKAEGQGFRIYRAKR 331