Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

 Score =  207 bits (528), Expect = 2e-58
 Identities = 108/264 (40%), Positives = 155/264 (58%), Gaps = 2/264 (0%)

Query: 78  DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGPIHKYDSA 137
           D  +L+ PK+++  +Y+L  L A+L  G  + +VGE R+GV+   K  A  G   K DSA
Sbjct: 69  DAAVLFLPKSRELTDYVLQALAAQLA-GRPLYLVGEKRAGVERAAKQLANLGRARKLDSA 127

Query: 138 RRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDTL 197
           R C  + G     PA  +++     + ++ +   L + SLPGVFSHG  D+GS LLL+ L
Sbjct: 128 RHCQLWQGEIEQAPAVPELDALAHHFTLELEDGPLQVISLPGVFSHGRLDVGSALLLEHL 187

Query: 198 PPL-SGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGHVYPS 256
             L SG+V+D G GAG+LG  + +  P  EL + D+ A A+ SS+ TL AN L   V   
Sbjct: 188 DNLPSGRVLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANGLEAEVIAG 247

Query: 257 DMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFLKYPPI 316
           D           IV+NPPFH G+ TSY A+E L+  + +HL+SGG + +VAN+FL+YPP+
Sbjct: 248 DGIDTAPRQLAAIVSNPPFHQGVHTSYQASETLIERAAEHLSSGGELRLVANAFLRYPPL 307

Query: 317 LEQAFGHCDIAAKTNKFAIYHAKK 340
           +EQ  G C    + N F IY AK+
Sbjct: 308 IEQHLGACQTIVERNGFRIYRAKR 331