Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 69/271 (25%), Positives = 109/271 (40%), Gaps = 14/271 (5%)

Query: 78  DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAY-GPIHKYDS 136
           D +L+  PK     E  L  L  +L  G  ++     +   +S   +   Y GP+    +
Sbjct: 110 DWVLIRVPKTLALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLA 169

Query: 137 ARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSL--PGVFSHGEFDLGSRLLL 194
            ++    +     TP   ++      Y   Y+  E  I  L    VF     D+G+R  L
Sbjct: 170 VKKARLLFA----TPQPMEVRT--SPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFL 223

Query: 195 DTLPPLSG--KVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVAN--QLH 250
             LP   G  +V D+G G GVL    A  NP     + D S +A++S+ E   A      
Sbjct: 224 PHLPKNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRD 283

Query: 251 GHVYPSD-MFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANS 309
             V   D +        + ++ NPPFH           R+  ++   L +GG++++V N 
Sbjct: 284 VRVRAGDGLEMQEPDSLDVVLCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNR 343

Query: 310 FLKYPPILEQAFGHCDIAAKTNKFAIYHAKK 340
            L Y   L + F   +  A T KF I  A+K
Sbjct: 344 HLGYHTKLSRLFRGVEQVAATPKFVILKARK 374