Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  197 bits (500), Expect = 4e-55
 Identities = 106/312 (33%), Positives = 168/312 (53%), Gaps = 2/312 (0%)

Query: 31  DRFPIELRQYCASVSVFTTHYGYY-SQLKAYPEITRYFGEQLTADLNADLILLYWPKAKQ 89
           D     L ++C+ V+     + ++ +Q          FG Q + D   D++++Y+PKAK 
Sbjct: 8   DELGHHLTRHCSEVAALALDFNHFQAQPSGKSGFRCEFGHQWSRDEKFDVVVVYFPKAKA 67

Query: 90  EAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFA-AYGPIHKYDSARRCSFYWGHCV 148
            A YL A+    L     +++ GEN+ G++S++K+   A+ P  K D+AR C  Y    V
Sbjct: 68  LAPYLFALAAWHLRPDGTLLITGENKGGIRSVDKLLGNAFSPACKIDNARHCLLYSATLV 127

Query: 149 HTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPPLSGKVIDIG 208
                 + E W   Y +     ++ I ++ GVFS  + D G+ LLLD LP L G+V+D G
Sbjct: 128 AEATKPNAEDWVSRYRLSLPSGDIQICNMVGVFSDKQLDQGTALLLDNLPKLEGRVLDFG 187

Query: 209 SGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGHVYPSDMFSDTGHHYNY 268
            GAGV+   + + NP ++LE  DI+A+A+ S + +L AN +   VY SD  + T   +N 
Sbjct: 188 CGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLKANGMEAKVYASDGLAQTDGLFNA 247

Query: 269 IVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFLKYPPILEQAFGHCDIAA 328
           IV+NPPFH GL ++     R +A+S   L  GG+  +VAN  L Y   + + FG  +  A
Sbjct: 248 IVSNPPFHDGLSSTTDIATRFVADSYKQLHKGGNWQIVANRHLPYSDTIAKVFGEVNTVA 307

Query: 329 KTNKFAIYHAKK 340
           + NK+ +Y  KK
Sbjct: 308 ENNKYKVYANKK 319