Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 17/275 (6%)

Query: 78  DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAY-GPIHKYDS 136
           +L+L+  PK      + L  L   L   T + +  + +S  K++ +  A + GP     +
Sbjct: 113 NLVLMKLPKNLNYFIHQLQRLSQSLAPNTPVYIGAKAKSINKALLETIAKHLGPASASLA 172

Query: 137 ARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDT 196
            ++           P A   E    S+AV  +   L+I +L  VF+  + D+G+R++LD 
Sbjct: 173 WKKTRVITCIADGKPRALPSEV---SWAV--KEFNLSISNLSNVFAANKLDIGARIMLDN 227

Query: 197 LPPLS-GKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQL------ 249
           LP      ++D+G G G+LG    +  P+ E+   D S +AI S+++   AN+L      
Sbjct: 228 LPEGHFDTIVDLGCGNGILGLRAKQCYPNAEVHFVDDSEMAITSARQNWQANKLDNPEQA 287

Query: 250 --HGHVYPSDMFSDTGHHY--NYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWV 305
              GH +  D  +  G     + ++ NPPFH G   +     ++  ++   L  GG + V
Sbjct: 288 KPQGHFHWDDCLTHLGDEVKPDLVLCNPPFHQGEAITDHIAWQMFLDAFHQLRPGGMLQV 347

Query: 306 VANSFLKYPPILEQAFGHCDIAAKTNKFAIYHAKK 340
           V N  L Y   L++ F +C+ AA   KF I  A K
Sbjct: 348 VGNRHLGYHVKLKRIFKNCETAASNGKFVILRAIK 382