Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., rRNA (guanine-N(2)-)-methyltransferase from Marinobacter adhaerens HP15

 Score =  162 bits (410), Expect = 1e-44
 Identities = 92/270 (34%), Positives = 140/270 (51%), Gaps = 9/270 (3%)

Query: 78  DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGP-IHKYDS 136
           D ++++ PKA+ E +  LA+          +V+VGE + G+    K   A  P   K DS
Sbjct: 75  DTLVVFLPKARAELDLRLALARWLAAPRARLVLVGEKKEGIAGAVKQLKAVAPQATKTDS 134

Query: 137 ARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDT 196
           AR C  +    +     F + +W     +D Q   L +  LPG+FS GE D G+RLL++T
Sbjct: 135 ARHCQVWCAENIEPLPEFSLREWMTWTGIDCQSVHLDVAGLPGIFSLGELDDGTRLLMET 194

Query: 197 L---PPLSGKVIDIGSGAGVLGCVMAKLN-----PHIELEMTDISALAIRSSQETLVANQ 248
           L   P  SG V+D   GAGVLG  + +       P + ++  D+ + A+  ++ T   N 
Sbjct: 195 LDGAPLRSGPVLDFACGAGVLGAWLHRWQERQGLPRLTIDGIDVQSQAVICARATYERNG 254

Query: 249 LHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVAN 308
           + G +  SD        +  I++NPPFHSG+ T  S TER L E V HLA GG + +VAN
Sbjct: 255 VSGRIMASDGLPGVEGSWPVILSNPPFHSGVRTDLSMTERFLREVVRHLAPGGEVRLVAN 314

Query: 309 SFLKYPPILEQAFGHCDIAAKTNKFAIYHA 338
           SFL Y P++++  G  +   +  +F +Y A
Sbjct: 315 SFLPYEPLMKRCIGPVERLRENQRFTVYRA 344