Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Ribosomal RNA small subunit methyltransferase C from Enterobacter sp. TBS_079

 Score =  264 bits (674), Expect = 3e-75
 Identities = 144/341 (42%), Positives = 208/341 (60%), Gaps = 14/341 (4%)

Query: 1   MQPYTAPSEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAY 60
           M  +T  SE+ LR  D F +  +L AG+++D  P   R  CA     T +Y ++  L   
Sbjct: 1   MSAFTPASEVLLRHSDDFEESRILFAGDMQDDLPA--RFDCAESRAHTQYYHHWQVLSRQ 58

Query: 61  PEITRYFGEQLTAD----LNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRS 116
            +    F   L A+     + D ++ YWPK K EA++ L  LL+ L  G +I VVGENRS
Sbjct: 59  MDDRARFS--LVAEQSDIADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGCDIFVVGENRS 116

Query: 117 GVKSIEKMFAAYGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRS 176
           GV+S E+M   Y  ++K DSARRC  Y G  +   A FD E+++  Y +D     LTI++
Sbjct: 117 GVRSAEQMLEGYAQLNKIDSARRCGLYHGR-LEKQATFDAEKFWDEYQLD----GLTIKT 171

Query: 177 LPGVFSHGEFDLGSRLLLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISAL 235
           LPGVFS    D+GS+LLL TL P   GKV+D+G GAGVL  V+A  +P + L + D+SA 
Sbjct: 172 LPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLATVLASHSPKVRLTLCDVSAP 231

Query: 236 AIRSSQETLVANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVD 295
           A+ +S+ TL AN L G V+ S++FSD    ++ I++NPPFH G+ETS  A + L+  +V 
Sbjct: 232 AVEASRATLAANGLEGDVFASNVFSDVNGRFDMIISNPPFHDGMETSLEAAQTLIRGAVR 291

Query: 296 HLASGGSIWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIY 336
           HL SGG + +VAN+FL YP +L++ FG  ++ A+T +F +Y
Sbjct: 292 HLNSGGELRIVANAFLPYPKVLDETFGFHEVIAQTGRFKVY 332