Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., methyltransferase small (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 25/265 (9%)

Query: 85  PKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGPIHKYDSARRCSFYW 144
           P+AK  A  LLA  + ++G G  IV+ G+   GV S+ K+  +     +  +       W
Sbjct: 75  PRAKDHARALLAEAIGRVGPGGLIVLDGQKTDGVDSLVKLAKSLLTGVEVYAKAHGKLLW 134

Query: 145 GHCVH--------TPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDT 196
           G            TP     E W  + A                FS G  D GS LL   
Sbjct: 135 GRVPDPLPDLAPLTPPLTSPEGWVTARAG---------------FSAGAVDAGSALLAAH 179

Query: 197 LPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGHVYP 255
           LP  L G V+D+G+G G L            +++ +    A+ +++  +   +       
Sbjct: 180 LPARLQGDVLDLGAGWGYLAKAALASGQVTGMDLVEAEFDALEAARRNVDDPRARFLWED 239

Query: 256 SDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFLKYPP 315
           + +F+  G  Y+ I+ NPPFH+  +   +  +  L  +   L   G + +VAN  L Y  
Sbjct: 240 AAVFAP-GKRYDAILCNPPFHTSRKADPAIGQMFLRTAARLLKPSGVLGLVANRHLPYEH 298

Query: 316 ILEQAFGHCDIAAKTNKFAIYHAKK 340
            L + FG      +   + I+HA+K
Sbjct: 299 TLAECFGEAQPVTEAQGYKIFHARK 323