Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., 16S rRNA m(2)G 1207 methyltransferase RsmC from Caulobacter crescentus NA1000

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 5/268 (1%)

Query: 73  ADLNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGPIH 132
           AD   D +    P    E  Y+LA  L  L  G  + V      G   ++K   A G   
Sbjct: 40  ADETFDAVTARAPAGAVERRYVLAHALRTLSPGGRLTVFAPKDRGGLRLKKELQALG-CE 98

Query: 133 KYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRL 192
             +SARR +     C+       +E   K+ A   +  E  + + PGVFS    D G+  
Sbjct: 99  VGESARRHNRICV-CLRPSLIPGLEDALKAGA-PRRIAENGLWTQPGVFSWDRLDAGTNA 156

Query: 193 LLDTLPPLSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH 252
           LL  LP  SG   D GSG G+L   +       +L + ++   A+  S+  +   +  G 
Sbjct: 157 LLQVLPAFSGVGADFGSGIGLLALNVLASPKVTKLTLVELDHRAVEVSRRNVTDPR--GE 214

Query: 253 VYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFLK 312
           +   D         +++V+NPPFH G     +  +  +  + + L  GGS+W+VAN  L 
Sbjct: 215 IVWVDARQTGLKDLDFVVSNPPFHEGGGEDKALGQAFIRAAAEALRKGGSLWIVANRHLP 274

Query: 313 YPPILEQAFGHCDIAAKTNKFAIYHAKK 340
           Y  IL ++F    +  +   + ++ AKK
Sbjct: 275 YEAILGESFSKVRLVGEGGGYKVFEAKK 302