Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., 16S rRNA m(2)G 1207 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  208 bits (530), Expect = 1e-58
 Identities = 118/335 (35%), Positives = 172/335 (51%), Gaps = 3/335 (0%)

Query: 5   TAPSEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQL--KAYPE 62
           T PS++ +R  +  +   VLV     D  P  L     SV      Y +Y  L  +A  +
Sbjct: 14  TNPSQVIIRNQETLSQHRVLVLNHEADSLPKALLDVAQSVDALALDYHHYLHLAPQANAK 73

Query: 63  ITRYFGEQLTADLNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIE 122
           +  YFG QL      D +++Y+PKAK  A YL  +    L    +++VVGEN+ GVKS+ 
Sbjct: 74  LRCYFGHQLPHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLLVVGENKGGVKSLV 133

Query: 123 KMFAAYGPIH-KYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVF 181
           K+   Y     K D+AR C  +    + T     +  W   Y +      +TI +L GVF
Sbjct: 134 KLLPKYFATGVKLDNARHCLLFGSSLIDTAPEIKLSDWTSQYQLSTPQGNITICNLVGVF 193

Query: 182 SHGEFDLGSRLLLDTLPPLSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQ 241
           S    D G+ LLL  LP LSG+V+D G GAGV+   + K  P + LE  DI+A+A+ S +
Sbjct: 194 SEKHLDQGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCE 253

Query: 242 ETLVANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGG 301
            TL AN +   VYPSD  + T   ++ I++NPPFH GL ++ S  +R +A+S   L S G
Sbjct: 254 LTLAANGMTAKVYPSDGLAQTSGKFDGIISNPPFHDGLASTTSIAQRFVADSAKQLQSKG 313

Query: 302 SIWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIY 336
              +V N  L Y   +   FG   + A+ NK+ +Y
Sbjct: 314 IWQIVTNRHLPYSDTIAAEFGQLTVPAENNKYKLY 348