Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., methyltransferase small (RefSeq) from Shewanella sp. ANA-3

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 12/269 (4%)

Query: 79  LILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAY-GPIHKYDSA 137
           L+L+  PK      + L  L   L  G +++V  + +S   S+ ++FA + GP     + 
Sbjct: 114 LVLMKLPKNLTYFAHQLMRLSQVLPAGCKVLVGAKAKSINASLLEVFATHLGPASASLAW 173

Query: 138 RRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDTL 197
           ++           P A       K    D     L I +L  VF+  + D+G+R++LD L
Sbjct: 174 KKTRVITCISDGKPRALP-----KEVTWDIPEFNLHISNLSNVFAANKLDIGARIMLDNL 228

Query: 198 PPLSGK-VIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQL---HGHV 253
           P    K ++D+G G GVLG   A+L P+ ++   D S +A+ S++     NQL    GH 
Sbjct: 229 PQGDFKTIVDLGCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWANNQLPAEKGHF 288

Query: 254 YPSDMFSDT--GHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFL 311
           +  D  +    G   + ++ NPPFH G   +     ++  ++   L +GG + +V N  L
Sbjct: 289 HWDDCMTHLPDGVEPDLVLCNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHL 348

Query: 312 KYPPILEQAFGHCDIAAKTNKFAIYHAKK 340
            Y   L++ F +C   A   KF I  A+K
Sbjct: 349 AYHVKLQRLFKNCTTVASNGKFVILQAQK 377



 Score = 23.5 bits (49), Expect = 0.009
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 207 IGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQL 249
           I    G L C +++LNP   L +   +  +   +++    NQL
Sbjct: 52  INDSFGALSCALSRLNPDWPLNVETDARTSFLGAEQNHHRNQL 94