Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  212 bits (539), Expect = 8e-59
 Identities = 152/496 (30%), Positives = 249/496 (50%), Gaps = 37/496 (7%)

Query: 345 EAFARVRQLEKLFVFAMLT--AIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAM 402
           +AF++ RQ E LF  A+L   A++   + +  L+  ++ P+  +  A + +  GD    +
Sbjct: 157 DAFSQ-RQQEILFKAAILALFALLFTFLVARRLATNLSRPIRDIGNAVKAIQQGDYSTPL 215

Query: 403 INTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDE 462
              +   E+G L+       R I      +   ++E    +  + K  +E + AN  K E
Sbjct: 216 PIVDDA-ELGALS-------RHINNLAEGLGQASREQHQAMAQLIKTREEAEKANSAKSE 267

Query: 463 FLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYH 522
           FLA  SHELRTP++G++G+ + L +         H+Y   +   S + L  +++D+LD+ 
Sbjct: 268 FLAMMSHELRTPMNGVLGMLQLLET--TRLTDEQHEYTA-LASESTEHLLKVINDILDFS 324

Query: 523 KMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSE--QPVWVSADPQRLEQ 580
           ++   AL+++    +L+       +   H   ++ L +   V +  Q + V  DP R+ Q
Sbjct: 325 RIERSALELEHIPFNLAELVGSCAQSFQHSAAQRKLGLDLLVPDDMQALQVQGDPTRIRQ 384

Query: 581 VLYNLIGNAIKYTSEGKIVISATY--IDDKV---RVQVVDTGQGIPAEQLEHIFEPLIQA 635
           +L NLIGNA+K+T +G++ +   +  +D ++      V D+G GIPAE LE +F+   QA
Sbjct: 385 ILVNLIGNALKFTEQGRVTVQCQWQALDHELLWFTCTVRDSGIGIPAESLERMFDAFQQA 444

Query: 636 GHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLASEEEIAQARLTE 695
            +  SR   G GLGL I+R L E M GTL   S+   G+ F+  +PLA            
Sbjct: 445 DNSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEGQGSVFTLEIPLALSR--------- 495

Query: 696 LPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGH 755
               Q P  L   LP  S   E  +   +L+ +D PVN  V+++ LR  G+ V  A DG 
Sbjct: 496 ----QTPPTLAPRLPTGSGDGEGRN---VLLVEDNPVNQTVVEAMLRSLGFTVSIATDGA 548

Query: 756 QVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFE 815
           Q + + +    E +L+D  +P + GY+   ++RQ     E+PII LTA     DR     
Sbjct: 549 QAVRSAESLIFEAILMDCRLPIIDGYEATRQIRQLPGCGEVPIIALTANALQGDREACLA 608

Query: 816 AGANDYLSKPFNKQEL 831
           AG NDYL+KPF + +L
Sbjct: 609 AGMNDYLAKPFKRNDL 624