Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1169 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  191 bits (484), Expect = 4e-52
 Identities = 161/525 (30%), Positives = 255/525 (48%), Gaps = 49/525 (9%)

Query: 390 AERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQ 449
           A R S   ++E     E+ +E  +LA   E + R  R+++     +N+ L    L++ ++
Sbjct: 428 ALRESQAHMEEQQAELEQTNE--QLAEQTEALARQ-RDQMD---EKNQRLNEAQLMLEQR 481

Query: 450 NDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIISSGQ 509
            DELQ A++ K EFLA  SHELRTPL+  + +A+ L     G +S         I S+G 
Sbjct: 482 ADELQRASRYKSEFLANMSHELRTPLNSSLILAKLLADNPAGNLSDEQVQFARSIYSAGN 541

Query: 510 RLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLR----IINQVS 565
            L TL++D+LD  K+  G  ++     +L+  +RLV  + +  L +   R     +    
Sbjct: 542 DLLTLINDILDISKVEAGKFEVH---PELTILSRLVDGMKNLFLPQAMERSLQFSVELAD 598

Query: 566 EQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATYIDDKVRVQVV-DTGQGIPAEQ 624
           + P  +  D QRLEQ+L NL+ NA K+T +G + +     DD +    V DTG GI  EQ
Sbjct: 599 DLPASLFTDRQRLEQILKNLLANAFKFTEKGSVTLRVEPRDDDLLAFAVRDTGIGIAQEQ 658

Query: 625 LEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLA- 683
              IFE   QA    +R   G GLGLSISR+L  L+ G + V S P  G+TF+  +P + 
Sbjct: 659 QAVIFEAFRQADGTTNRRYGGTGLGLSISRELANLLGGQIEVQSAPGAGSTFTLVVPQSY 718

Query: 684 SEEEIAQARLTE------LP-----------HFQAPEVLDSELPEQSNLPEN-EHGPL-- 723
           SE  +A+  + E      LP             QAP    S  P++  LP++ +  P   
Sbjct: 719 SEARVAEPLVVEPSSSPSLPSRPVEPPQRRAEPQAPRHAVSAPPQR--LPDDRDRFPFKE 776

Query: 724 --LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGY 781
             +LV +DEP   R+L        Y    AQ+     +   + KP+ +LLD+ +P  SG 
Sbjct: 777 RCVLVIEDEPQFARILHDLAHELQYSCLLAQNADDGFDTALQYKPDAILLDMRLPDHSGL 836

Query: 782 QVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA---ARIVAH 838
            V E+L++      +P+ +++     D +    + GA  Y  KP  ++EL    +R+ A 
Sbjct: 837 TVLERLKENPATRHIPVHVVSV---EDRKEAAMQMGAVGYAMKPTTREELKDVFSRLEAK 893

Query: 839 LTASKAELRRIENAQLQKELKHRAM----VEASLLETQGRLLEQL 879
           L      +  +E+  LQ+E   R +    +E + +E   + LEQL
Sbjct: 894 LAQKVKRILLVEDDALQRESMSRLIEDVDIEITAVEFGAQALEQL 938



 Score = 80.5 bits (197), Expect = 7e-19
 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 1/116 (0%)

Query: 721  GPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKP-ELVLLDIMMPGMS 779
            G  +LV DD+  N+  L S L  +G  V  A++G + ++ ++ +   +LVL+DIMMP M 
Sbjct: 1044 GRKILVVDDDVRNVFALTSALEQKGALVEIARNGLEAIDKLQHDTDIDLVLMDIMMPEMD 1103

Query: 780  GYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARI 835
            G+   +++R+    A+LPII +TA    DD+ R   AGANDYL+KP +   L + I
Sbjct: 1104 GFTAMQEIRKDVRFAKLPIIAVTAKAMKDDQDRCLSAGANDYLAKPIDLDRLFSLI 1159



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 16/86 (18%), Positives = 42/86 (48%)

Query: 724 LLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQV 783
           +L+ +D+ +    +   +      +   + G Q LE ++    + +++D+ +P M G ++
Sbjct: 901 ILLVEDDALQRESMSRLIEDVDIEITAVEFGAQALEQLRDTVFDCMIIDLKLPDMDGSEL 960

Query: 784 CEKLRQTYDHAELPIIMLTALNQSDD 809
            E++ +    +  P+I+ T  N + D
Sbjct: 961 LERMAKEDICSFPPVIVYTGRNLTRD 986