Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  198 bits (503), Expect = 2e-54
 Identities = 183/641 (28%), Positives = 293/641 (45%), Gaps = 73/641 (11%)

Query: 318 GEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQLEKLF-VFAMLTAIVLVVIASHYLS 376
           G+Q + A+A +   +  W  ++       F  + +L++LF V   L A  L+V    +L+
Sbjct: 362 GKQKVVAWAKV--ASTGWTYLMVADRDTVFGDILRLDRLFTVIGYLMAGGLLVFYLGFLA 419

Query: 377 NF----------ITSPLLKLTWAAERVSAGDLDEAM--INTERKDEIGR-LAVSFERMQR 423
                       ++ PL  L     R+++G   +     +    DE GR +A   +R+ R
Sbjct: 420 FLYIRVREMSVRLSGPLSALNAMIRRIASGSYFQTAPAFDVRELDETGREVAAMGDRLGR 479

Query: 424 SIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAE 483
           +           N+EL +N   + +  D  Q A + K EFLAT SHE+RTP++ +IG+  
Sbjct: 480 A-----------NEELIANREELVRARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTG 528

Query: 484 ALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATR 543
            L+   +GP+          I  SG+ L  L++D+LD+ ++  G L +      LS   +
Sbjct: 529 LLL---DGPLEPRQIDYARTIQRSGEHLLGLINDILDFSRIDTGRLVLVDRDFSLSHEVQ 585

Query: 544 LVLELSHHLLGKKTLRI-INQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISA 602
            V+ L       K L + I+           D QRL Q+L NL+GNA+K+T +G + +  
Sbjct: 586 AVVSLCGVAASAKRLSVRIDLDRALAPGYRGDSQRLRQILVNLVGNAVKFTDKGMVTVQG 645

Query: 603 TYIDDK-----VRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLI 657
             +  +     +R++VVDTG GIP E+   +F    Q    A+R   G GLGL+ISR+L 
Sbjct: 646 DVLKIENDIHWLRLRVVDTGCGIPRERFNDLFAAFQQLDGSATRTHGGTGLGLAISRKLA 705

Query: 658 ELMHGTLYVSSQPMVGTTFSFTLPLA--SEEEIAQARLTELPHFQAPEVLDSELPEQSNL 715
            LM G + VSS P  G+ FS  +P+   S        L +    +  E   +++P ++  
Sbjct: 706 RLMGGDITVSSTPGEGSVFSVVVPMVPLSRTPAPDGTLGDGDAERGEEPPAADVPTEA-- 763

Query: 716 PENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKP-ELVLLDIM 774
                  ++LVA+D   N  ++ + L  +G+RV  A +G + L  ++   P ++VL+DI 
Sbjct: 764 -AASRALVVLVAEDILENQILVQAVLEKQGHRVILAANGREALAKLRGADPVDVVLMDIQ 822

Query: 775 MPGMSGYQVCEKLRQTYDH---------AELPIIMLTALNQSDDRVRGFEAGANDYLSKP 825
           MP M G   C  +R              A +PII  TA     DR R   AG N++L+KP
Sbjct: 823 MPVMDGLDACRAIRGLPPEVHFSDGRPIAGVPIIAFTADALPGDRERFLSAGMNEHLAKP 882

Query: 826 FNKQELAARIVAHLTASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEA 885
            N + L A ++  + A +    R   A   ++           LE   RLL+     PEA
Sbjct: 883 LNARRLRA-LLGDIAAGRPLTPRSSAAPSPRK----------SLEAPRRLLD-----PEA 926

Query: 886 ILCVKEG------NKVRFANEAAARLFRRTPEQLKRSNAEE 920
           +  ++          +R A EA     R  PE L R   EE
Sbjct: 927 LAQLRTSLGEDYPIYLRAAEEALRHRARALPEALARGAFEE 967