Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  178 bits (452), Expect = 2e-48
 Identities = 150/487 (30%), Positives = 227/487 (46%), Gaps = 50/487 (10%)

Query: 408 KDEIGRL--AVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLA 465
           KD+I R   A  F+R +   +  + L     KE  S L I+ ++  EL   + +K +F A
Sbjct: 169 KDDIVRQMEAEIFQRSKEVAKSNLKL-----KEANSELAILYEKTREL---DDIKTQFFA 220

Query: 466 TTSHELRTPLHGMIGIAEALISGANGP-ISAAHKYQLDIIISSGQRLATLVDDLLDYHKM 524
             SHELRTPL  ++G    + S    P ++ A K  LD++  + + L   V+DLLD  K+
Sbjct: 221 NVSHELRTPLTLILG---PVTSRQEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKL 277

Query: 525 RYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQP--VWVSADPQRLEQVL 582
             G + +Q    D++   R  L    H       R I    E P  +W   DP++  +VL
Sbjct: 278 EAGQMRMQYVRTDVTRLCRFALS---HFDSLAEERAIAFTLEAPAVLWAEIDPEKFRRVL 334

Query: 583 YNLIGNAIKYT-SEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASR 641
            NL+ NA K+T ++G+I +S     D V ++V D G GIP      +FE   Q    + R
Sbjct: 335 LNLLSNAFKFTPNQGEITVSLIDRGDDVILRVSDNGPGIPESMWTAVFERFRQVDGGSDR 394

Query: 642 YRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLASEEEIAQA-----RLTEL 696
              G GLGL+I R+ ++L  G + +      G  F+  LP  +  ++A        L E 
Sbjct: 395 RHGGTGLGLAIVREFVDLHGGEVSIGQASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEG 454

Query: 697 PHFQAPEVLDSELPEQSNLPE------------------NEHGPLLLVADDEPVNLRVLD 738
           P F     +D  L  +  L +                    + PL+LV +D P ++    
Sbjct: 455 PGFYRD--IDKGLEGEDRLTDLAPSAAASGPASGPAGGVGINAPLVLVVEDNP-DMNAFV 511

Query: 739 SFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPI 798
           S +    YRV +A DG + LE      P+L++ D+MMP MSG  + + LRQ    +++PI
Sbjct: 512 SEIVAGHYRVISAFDGQEGLEKAHETLPDLIISDVMMPRMSGETMADTLRQDGLTSDIPI 571

Query: 799 IMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAELRRIENAQLQKEL 858
           IMLTA      R R       DYL KPF++ EL AR    +    A+ RR +    + E 
Sbjct: 572 IMLTAKADEAMRARMLRGVVQDYLFKPFSRLELLARADGLI----ADHRRKQMVLRESEA 627

Query: 859 KHRAMVE 865
           + RA  E
Sbjct: 628 RFRATFE 634