Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 866 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  189 bits (481), Expect = 6e-52
 Identities = 129/397 (32%), Positives = 196/397 (49%), Gaps = 29/397 (7%)

Query: 446 IRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIII 505
           +RK  DE ++AN+ K +FLA  SHELRTPL+G++G+A+ L    + P+ A  +     I 
Sbjct: 485 LRKVKDEAEVANRAKSDFLAVMSHELRTPLNGVLGMADLL---CDTPLDAEQRRYTRTIA 541

Query: 506 SSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVS 565
            S + L  +++D+LD  K+  G LD++    D ++    V  L       K + +   + 
Sbjct: 542 ISAEALLVIINDILDLSKIEAGHLDLESRPFDPATLLEGVRTLMEGPARDKAIALRTSIE 601

Query: 566 -EQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATY-IDDKVRVQVVDTGQGIPAE 623
             +P     D  RL Q+L NL  N +K+T +G + +         +R +V DTG GIP E
Sbjct: 602 GAKPPLRLGDEGRLRQILLNLANNGVKFTEKGSLTLRLKAGTGGALRFEVEDTGIGIPKE 661

Query: 624 QLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLA 683
           + + +F    Q     +R   G+GLGLSI R+L+ LM G L   S P VG+ F F + L 
Sbjct: 662 KQDTLFHDFTQVSASTARRFGGSGLGLSICRRLVGLMGGRLGFDSTPGVGSLFWFEVDL- 720

Query: 684 SEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEHGPL-LLVADDEPVNLRVLDSFLR 742
                             PEV+ S+ P     P  +  PL +LV +D  +N +V    L 
Sbjct: 721 ------------------PEVVASQSPPP---PPFQGPPLSILVVEDNEINRQVALGLLT 759

Query: 743 LEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLR-QTYDHAELPIIML 801
             G+RV    DG   +  +     +L+L+D+ MPGM GY+    +R +      LPI+ +
Sbjct: 760 KLGHRVTCVDDGAAAVRVVDTMPFDLILMDVQMPGMDGYEATRLIRGKPAPVGGLPIVAM 819

Query: 802 TALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAH 838
           TA   S D      AG   YLSKP  ++ LA  ++AH
Sbjct: 820 TANATSGDVAAAMAAGMTGYLSKPITRKRLAEALMAH 856