Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  204 bits (518), Expect = 4e-56
 Identities = 156/482 (32%), Positives = 243/482 (50%), Gaps = 34/482 (7%)

Query: 444 LIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDI 503
           L +++  +  + AN+ K EFLA  SHE+RTP++G++G+ +  +  A  P     +  L++
Sbjct: 520 LELQQAKEAAESANRAKGEFLANMSHEIRTPMNGILGMTDLALDSALTP---EQRDYLEM 576

Query: 504 IISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQ 563
           + SS   L  +++D+LD+ K+  G L+++     L    R  L+       +++L +  +
Sbjct: 577 VKSSADALLVIINDILDFSKIEAGKLELEHIHFHLRQLLRETLKPLELRARQRSLTLRCE 636

Query: 564 VSEQPV-WVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATYIDDKVRVQVVDTGQGIPA 622
           V E+       DP RL QVL NL+GNAIK+T EG++ +     D  +   V DTG GIPA
Sbjct: 637 VPEEVADGYLGDPGRLRQVLINLVGNAIKFTEEGQVAVRVEARDGLLHFAVSDTGIGIPA 696

Query: 623 EQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPL 682
           ++ + IFE   QA    +R   G GLGL+I  +L+ LM G ++V S P  G+TF FT  L
Sbjct: 697 DKQQLIFEAFSQADSSVTRRFGGTGLGLTICTRLVRLMGGHMWVESDPGQGSTFHFTARL 756

Query: 683 ASEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEHGPL-LLVADDEPVNLRVLDSFL 741
             E     A   E    +   VL                PL LLVA+D PVN +++ + L
Sbjct: 757 --EAVAGPAESGEADAGRGEVVLP---------------PLRLLVAEDNPVNQKLVLTLL 799

Query: 742 RLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTY----DHAELP 797
           +  G+RV  A +G Q L A+  +  +LVL+D+ MP M G +   ++R       D   LP
Sbjct: 800 QKRGHRVTLADNGQQALAALATDHFDLVLMDMQMPVMGGLEATRRIRAAEAARGDGQHLP 859

Query: 798 IIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAELRRIENAQLQKE 857
           I+ +TA   + DR    EAG + Y+SKP  + E  + +   L     E  R   A     
Sbjct: 860 IVAMTANAMAGDRELCLEAGMDGYVSKPLRRDEFFSAMADVL---PPERLRQAGAAAAIP 916

Query: 858 LKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFR-RTPEQLKRS 916
              +A V A+  E+    L + + A EA+  + EG++  FA     ++F    P  L+R 
Sbjct: 917 ADGQAAVAAAPSESAPAALRRCDRA-EAVARL-EGDEELFA--MLVKMFSDDLPNYLQRL 972

Query: 917 NA 918
           NA
Sbjct: 973 NA 974



 Score = 32.0 bits (71), Expect = 3e-04
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 4/115 (3%)

Query: 856 KELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANEAAARLFRR--TPEQL 913
           +++  R   E  L+ T  RL   +ES    IL   E  ++  AN+A  +LF     P++L
Sbjct: 375 QDITERKRDEDFLMATTSRLSALIESMQAGILVEDENRQIVLANQALGQLFELDVDPQEL 434

Query: 914 KRSNAEELIAP-KFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGSGLQAMYI 967
              +   ++   + L  +   +   ++  V+D R  L  ++ RL  G  L+  YI
Sbjct: 435 VGVDCRLVLQHLQGLCADGARFVPRVEAVVEDRRAVLGEEI-RLADGRVLERDYI 488