Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 97/448 (21%), Positives = 170/448 (37%), Gaps = 71/448 (15%)

Query: 78  RLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTS 137
           +LA ++  ++D  ++T  +R+GV + DGE F A  V ++    +  P+  ++     V S
Sbjct: 69  QLATAWNWSEDGKTLTMTLREGVTYHDGEPFDAASVKFNLDRARTLPDSLRKSELASVDS 128

Query: 138 VEKVDEYKVRFRLSEANSNVPYEIS------LIPIVAEHVWKDVKDPTTFTNENPVGTGP 191
           VE +D   V  +L +A++ +  ++S      L P  A+  +            NPV +GP
Sbjct: 129 VEVIDAKTVAIKLKQADATLVSQLSDRAGMMLAPKAAQGEFAS----------NPVCSGP 178

Query: 192 FTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPD 251
           +  +        +  R  NYW+      D +    I +    L  + + +LD      P 
Sbjct: 179 YKFVQRVQQDRIVLERFDNYWNKQAYHFDKVVFLPIPDTSVRLANLRSGDLDIIERVAPT 238

Query: 252 IDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDI 311
             +T    +    Y  P  G    M N  N + A      +   R+AF +++DR  I  +
Sbjct: 239 DVKTVKGDSKLAIYNTPGLGYMQLMFNIGNGEKANSPMGKDKRVRKAFELSIDRDAINQV 298

Query: 312 AFYG--SGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDG 369
            F G  + +   F     Y          + K     T D+E SK LLA+AG        
Sbjct: 299 VFEGLYAPSAQPFPKNSPY----------YDKELPIPTRDIEKSKALLAQAG-------- 340

Query: 370 FVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQL-----QEVGIKAKARTPEFAVYNQAM 424
            V+ P     ++           NN +   V Q+     +E G K      E+A      
Sbjct: 341 -VKLPLAVDLKVA----------NNPIAQQVGQIIQAMAEEAGFKVNLIATEYATMLSEQ 389

Query: 425 LEGTYDVAYTNYFHGADP------FTYWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLD 478
             G + +  + +    DP      F     G N      DG        + + +LD LL+
Sbjct: 390 ASGNFQIGMSAWSGRPDPDGDIHQFVTCKGGQN------DGK-------YCNARLDELLN 436

Query: 479 SFYKTADKNEQLAIAHGIQKIIAENQVT 506
                 D  ++ A+ +   +++A+   T
Sbjct: 437 KARTVNDVAQRQALYNDALRLLADEVPT 464