Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., peptide ABC transporter substrate-binding protein from Synechocystis sp000284455 PCC 6803

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 97/408 (23%), Positives = 178/408 (43%), Gaps = 51/408 (12%)

Query: 46  NPYLATNLRTT--TDFIYEPLVVFNEMKGNTPVFRLAE-----SYKMADDLMSVTFDIRK 98
           NP+LAT  +    +    EPL  F++ +GN   F  AE     +  +A D +SVT+ ++ 
Sbjct: 59  NPHLATGFKDAEASRIALEPLASFDQ-EGNLVPFLAAEIPSVENGGVAADGLSVTWKLKP 117

Query: 99  GVKWSDGEAFTADDVVYSFGLLK-AKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSN- 156
            V WSDG+ F+A+DV +++  L   K      G  + +  VE +D+  V+    E N   
Sbjct: 118 DVLWSDGQPFSAEDVAFTYKFLSDPKTGATSTGTYEAIAKVEALDKNTVKITFKEPNPAW 177

Query: 157 -VPYEISLIPIVAEHVWKDV---KDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYW 212
            +P+  S   I+ +H++KD    K      N  P+GTGP+ V       + +   NP+Y 
Sbjct: 178 FLPFVGSEGMILPQHIYKDFVGEKARQAPANLLPIGTGPYRVTSFKPGDVVLYEVNPHYR 237

Query: 213 DAANLEVDCLRVPQIANNDQLLGKIVNS-ELDWTSSFVPDIDRTYAAANPNHHYWYPAAG 271
           D  N+    + +    +       ++ + + D+  +   + +   + A           G
Sbjct: 238 DRKNIGFQQVEIKGGGDATSAARAVLQTGDADFALNLQVEDNILQSLAQGGKGEIVADLG 297

Query: 272 --TQAFMVNFKNPDPAKKEA-----------LDNVDFRRAFSMALDRQTIIDIAF--YGS 316
             ++  + N  +PDPA+              L +   R+A ++ +DR  I    +   G 
Sbjct: 298 SLSERVIFNLSDPDPARTNGDRSSVKFPHPFLQDPLVRKAITLGIDRDLIAKQLYGVTGQ 357

Query: 317 GTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSG 376
            T N       YA +  S +        FN  +   +++LL +AG+KD NG+G +    G
Sbjct: 358 PTANVLVLPQQYASQNTSFQ--------FNPTE---AQQLLDQAGWKDSNGNG-IRDKDG 405

Query: 377 KSFELLIQSPNGWTDFN----NTVQLAVEQLQEVGIKAKARTPEFAVY 420
              +++ Q     T  N     T Q+  + LQ +G+  + ++ + +V+
Sbjct: 406 IELQMVFQ-----TSVNPLRQKTQQVIKQTLQAIGVGVELKSIDPSVF 448