Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 120/480 (25%), Positives = 196/480 (40%), Gaps = 83/480 (17%)

Query: 79  LAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYS----------------FGLLKA 122
           LAESY++++D    TF +RKGVK+ +G   TA DV YS                F  +K 
Sbjct: 76  LAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERVVNPATQSPGAGFFATIKG 135

Query: 123 KPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISL---IPIVAEHVWKDVKDPT 179
             E    G    ++ +   D + +RF L+  ++   + ++L     +  E V K   D  
Sbjct: 136 VEEA-SAGKGGELSGITVQDPHTIRFELTRPDATFLHVMALNFAHVVPKEEVEKHGAD-- 192

Query: 180 TFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVN 239
               +NPVG+G F + +    Q  +  R  +YW+    ++D +           L ++ N
Sbjct: 193 --FGKNPVGSGAFKLAEWTLGQRLVFERFTDYWNEGLPKLDRITFEVGQEPVVALLRLQN 250

Query: 240 SELDWTSSFVPDIDRTYAAANPNHHYWYPAAG---TQAFMVNFKNPDPAKKEALDNVDFR 296
            E+D     +P         +PN        G   T    +N       K    D V+ R
Sbjct: 251 GEIDVPGDGIPPAKFVEVTNDPNFKDLIIRGGQLHTGYVTMN------VKMAPFDKVEVR 304

Query: 297 RAFSMALDRQTIIDIAFYGSGTVND--FASGLGYAFEAWSDEATHKKYKGFNTYDVEGSK 354
           +A +MA+++  I+ I    +   N     S  GYA          K Y G+  YD EG+K
Sbjct: 305 KAVNMAINKDRILRIINGRAVAANQPLPPSMPGYA----------KDYAGY-AYDPEGAK 353

Query: 355 KLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQ-LQEVGIKAKAR 413
           KLL +AG     GDGF       S EL + +    TD    +  A++Q L+ +GI A  +
Sbjct: 354 KLLEQAGL----GDGF-------STELYVMN----TDPQPRIAQAIQQDLKAIGITASIK 398

Query: 414 TPEFA-------VYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMP-RFAM 465
           +   A         NQA +  +  +A+   F   DP  +    Y   L  G  +P  +  
Sbjct: 399 SLAQANVIAAGGEENQAPMIWSGGMAWIADF--PDPSNF----YGPILGCGGAVPGGWNW 452

Query: 466 HYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPVMSGA-WMYQYNTTRFT 524
            ++ +++LD       K A+ +     A   ++      + + +M  A W   +N  RFT
Sbjct: 453 SWYCNEELD------KKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPIFNEERFT 506