Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 44  NFNPYLATNLRTT--TDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVK 101
           +FNP LA     T  +  ++E L+   E +  T    LAE     DD+ S TF +R   K
Sbjct: 78  SFNPILAKGEVATGVSSLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAK 137

Query: 102 WSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSN-VPYE 160
           W+DG+  T +DVV+SF ++K    L      + V S EK  E  V FR  E N++ +P  
Sbjct: 138 WADGKPVTPEDVVFSFDMVKEHNPLFS-NYYRHVISAEKTGERDVTFRFDEKNNHELPNI 196

Query: 161 ISLIPIVAEHVWK------DVKDPTTFTNENPVGTGPFTV 194
           +   PI+ +H W+        +D +  T E  +G+GP+ +
Sbjct: 197 LGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKI 236



 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 15/191 (7%)

Query: 356 LLAKAGFKDVNGDGFVETPSGK--SFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKAR 413
           L  +AG+ ++ G   V   +G+  SFE+L+ +P     F  TV   V  ++++GI A+ R
Sbjct: 432 LFKEAGY-ELKGSRLVNAKTGEPFSFEILLSNPT----FERTVTPFVNSVRKIGIDARIR 486

Query: 414 TPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHYFTDKKL 473
           T + + Y   +    YD+ Y  +     P    +  + SA  +  G   +A     D  +
Sbjct: 487 TVDDSQYTNRVRSYDYDMIYGIWAQTLVPGNEQSDYWGSASVNQPGSRNYA--GIADPAI 544

Query: 474 DGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNTTRFTGWWSEENPK 533
           D L+       ++ E +A    + +++  +   +P      ++     R   W     PK
Sbjct: 545 DELIRRIVFAPNREELVATTRALDRVLLAHHYVVP------LFYSKALRVAYWNHLARPK 598

Query: 534 GRPSVWAGIPE 544
             P      P+
Sbjct: 599 ELPYYGMDFPD 609