Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  101 bits (252), Expect = 6e-26
 Identities = 107/458 (23%), Positives = 199/458 (43%), Gaps = 50/458 (10%)

Query: 79  LAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSV 138
           LA  + +++D +   F +R+ V+W DG  FTA+ V +S   LK       R     V   
Sbjct: 93  LATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILALKENHPRG-RATFAHVKEA 151

Query: 139 EKVDEYKVRFRLSEANSNVPYEISLI-----PIVAEHVWKDVKDPTTFTNENPVGTGPFT 193
             ++ ++V   L++     PY ++       PIV +H+++  K      N  PVGTGP+ 
Sbjct: 152 NVLNSHEVELTLAKP---APYLLTAFASFEAPIVPKHLYEGTKIAENPHNVAPVGTGPYK 208

Query: 194 VIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDID 253
            ++       +  RN +YW +    +D +    I +    +  I   E+  +++ +P  D
Sbjct: 209 FVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVSTANLPLTD 268

Query: 254 RTYAAANPN------HHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQT 307
                ANPN         + P+     F  N +N      + L ++  R A + A+D+  
Sbjct: 269 IDRLKANPNLVVDTDPAPYSPSIARAEF--NLEN------KYLADIKVRHAIAHAVDKDF 320

Query: 308 IIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNG 367
           I++  + G  T  D       A + +S +    KY+    +D   S+KLL +AG+     
Sbjct: 321 IVNTVYLGYATRLDGPVSPDLA-KFYSPDL--PKYE----FDPAKSEKLLDEAGYAR-GA 372

Query: 368 DGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVY-NQAMLE 426
           DGF        F+L I           T +   + L +VGIK + RT +FA +  +   +
Sbjct: 373 DGF-------RFKLFIDPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTD 425

Query: 427 GTYDVAYTNYFHGADPFT-----YWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSFY 481
             +D+A     +  DP       YW+  +        G+P      +++ ++D LL++  
Sbjct: 426 RDFDIAIEGMSNLYDPTVGVQRLYWSKNFK------PGVPFTNGSKYSNPEVDRLLETAA 479

Query: 482 KTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYN 519
              D  ++L + +  QK++ E+  T+ +++ A +  Y+
Sbjct: 480 VEIDPKKRLELFNEFQKLVVEDLPTLDIVTPAVITVYD 517