Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 75.9 bits (185), Expect = 4e-18
 Identities = 99/409 (24%), Positives = 161/409 (39%), Gaps = 35/409 (8%)

Query: 44  NFNPYLATNLRTTTDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWS 103
           N +P     +    D ++EPLV +   KG      LA  +K+ D   ++   +R+GVK+ 
Sbjct: 48  NLDPQSHYAIWAIQDLMFEPLVKYG--KGGQIEPCLATDWKIEDGGKTLHLTLREGVKFQ 105

Query: 104 DGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISL 163
           DG  F A    ++        +      +K   S+E VD+Y +     E    +  E+S 
Sbjct: 106 DGTKFDAAACKWNLERWMGIDQFSWMNCSKHFQSLEVVDDYHITVHFKEPVLALMQELSY 165

Query: 164 IPIVAEHVWKDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLR 223
                    K V     F  + PVGTGP+  I     Q   +  +  + D    E   L 
Sbjct: 166 TRPTRFLSPKSVDADGKF--KEPVGTGPWVQISADDTQSVFEHYDGYWGDKPTYE--RLE 221

Query: 224 VPQIANNDQLLGKIVNSELD-----WTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVN 278
              I +    +  +   E+D     W +   P+  +   AA  N        G    ++ 
Sbjct: 222 AKVIPDARSRVAALRAGEIDLVGGFWIAPLTPEEGKQLEAAGFN---VVVDPGNVTLVMA 278

Query: 279 FKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYG--SGTVNDFASGLGYAFEAWSDE 336
           F NPD A  E L +   R+A S+ +DR  I  + ++G      N F++ L YA + +   
Sbjct: 279 F-NPDRA--EPLKDPQVRKAVSIGIDRAAISKVLYHGYAKPAGNMFSAALPYAGKQFDAP 335

Query: 337 ATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFEL-LIQSPNGWTDFNNT 395
                       D   +  LL KAG+        + +  GK   L L+ SP+        
Sbjct: 336 VR----------DAAAASALLEKAGWT----GSPIRSKDGKPLTLELVVSPDAVPGSRVI 381

Query: 396 VQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVA-YTNYFHGADPF 443
            ++   +++EVGI    R+ + A  +  MLE  YD+  +  Y    DPF
Sbjct: 382 AEVIQSEMKEVGIDLVIRSVDHASKHTDMLEQKYDLGFFLTYGAPYDPF 430