Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 82.0 bits (201), Expect = 5e-20
 Identities = 95/400 (23%), Positives = 149/400 (37%), Gaps = 56/400 (14%)

Query: 54  RTTTDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDV 113
           R   D IYE L+         P   LA       D  +  F +R+G+K+ +GE F AD V
Sbjct: 47  RQVNDNIYEALMARTATGDLVP--GLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAV 104

Query: 114 VYS-FGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVW 172
           V S   ++      +Q      ++  EKVD+  VR   S  +  +P  +  + +V     
Sbjct: 105 VASVLRVIDPANNSEQMAYLGPLSGAEKVDDLAVRIITSAPDPILPARMYWLKMVPAAYS 164

Query: 173 KDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQ 232
           K+     T   E PVGTGP+               N +YW     ++D +    ++    
Sbjct: 165 KN----ATAIAEKPVGTGPYKFGTWDRGNSITMTANTDYW-GGEPQIDDVTYRFVSEAGT 219

Query: 233 LLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDN 292
            L  +V  E D   + +P+   +   A            T   ++   NP      A+ +
Sbjct: 220 RLSGLVAGEFDVVVNLLPEFADSVPQAKS-----VSGLETSVIILGVDNP------AVKD 268

Query: 293 VDFRRAFSMALDRQTIIDIAFYGSGTVN------DFASGLGYAFEAWSDEATHKKYKGFN 346
           V  RRA +MA+DR  + +  F G+  V         A G   + E W             
Sbjct: 269 VRVRRALNMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENW------------- 315

Query: 347 TYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEV 406
            YD +G+KKL+A+AG      D             L+     W      ++       EV
Sbjct: 316 PYDPQGAKKLIAEAGAAGTTID-------------LVGEAGRWLKDRELIEAVAAYWTEV 362

Query: 407 GIKAKARTPEFAVYNQAMLE-----GTYDVAYTNYFHGAD 441
           G+K      EF+VY   + +      +Y V  +N    AD
Sbjct: 363 GLKVNVEILEFSVYLDRIFDMGNRPDSYFVLNSNELFDAD 402