Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  117 bits (292), Expect = 1e-30
 Identities = 141/528 (26%), Positives = 234/528 (44%), Gaps = 81/528 (15%)

Query: 7   KTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDF-----IY 61
           ++A+A A +A A + +APA A++   ++        ++ +P+  T    T DF     +Y
Sbjct: 6   RSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVT---ATNDFRILVNVY 62

Query: 62  EPLVVFNEMKGNTPVF-RLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFG-- 118
           + LV F +  G   V   LAES+K++DD  + TF +R+GVK+ DG  F A+ V ++F   
Sbjct: 63  DGLVRFKD--GTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRM 120

Query: 119 LLKAKPELDQRGIN-----KWVTSVEKVDEYKVRFRLSEA----NSNVPYEISLI--PIV 167
           L K  P  D            V +V  +DE+ V F+LSEA     SN+ Y   LI  P+ 
Sbjct: 121 LKKDHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVA 180

Query: 168 AEHVWKDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWD-AANLEVDCLRVPQ 226
            E   K+          +P GTGPF  ++  + Q  +  RNP+YWD AA L+    R   
Sbjct: 181 VEKHGKEY-------GRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFR--P 231

Query: 227 IANNDQLLGKIVNSELDWTSSFVPDIDRTY-------AAANPNHHYWYPAAGTQAFMVNF 279
           I + +  + +++   +D      PD   T+        A     H W+    T+      
Sbjct: 232 ITDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTK------ 285

Query: 280 KNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATH 339
           + P   K+        R+A + A+++QT++D    G+ TV   A  +  AF  W + +  
Sbjct: 286 QGPFADKR-------VRQAANYAVNKQTLVDDVLRGTATV--AAGPIPPAFN-WVESSVE 335

Query: 340 KKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLA 399
                   +D E +K LLA+AG         VE P    +  + +  +G  D        
Sbjct: 336 P-----YAHDPEKAKALLAEAG---------VENPQVTFY--VTEGGSGMLDPITMGAAI 379

Query: 400 VEQLQEVGIKAKARTPEFAVYNQAM---LEGTYDVAYTNYF-HGADPFTYWNSGYNSALQ 455
              LQ VG K K  T E+  +   +   LEG  D+A   +  +  D   Y     ++   
Sbjct: 380 QADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMAEMAWMTNDPDTVPYLTLRTDAMPD 439

Query: 456 SGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAEN 503
            G     F   Y+++ +LD LL+   ++ D+ E+  +   +Q I+ ++
Sbjct: 440 KGG----FNSGYYSNPQLDELLEKARRSTDQAERGKLYGEVQSIVHDD 483