Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 132/492 (26%), Positives = 204/492 (41%), Gaps = 77/492 (15%)

Query: 5   IKKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNL---RTTTDFIY 61
           +K+T +  A++    S  APAFA S    +    P       P +AT     R     + 
Sbjct: 3   MKRTLIMGALMLG--SALAPAFAASGPVKI--VLPEEADLLEPCMATRSNIGRIIMQNVS 58

Query: 62  EPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFG-LL 120
           E L   +  +G   + RLAES++  +D  S  F++R GVK+SDG  F A DV YSF  ++
Sbjct: 59  ETLTELDVREGKGLMPRLAESWEQKED-GSWRFNLRTGVKFSDGTDFNAKDVKYSFDRVM 117

Query: 121 KAKPELDQR----GINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDVK 176
             K   + R    G+N     ++ VD+  V F +      +P  +SL+ IV E      +
Sbjct: 118 SDKNACESRRYFGGMN---IKIDVVDDTTVDFTVDPVQPILPLLLSLLTIVPE------E 168

Query: 177 DPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGK 236
            P  F  E PVGTGP+ + D    Q  +     +YW     EV        A+       
Sbjct: 169 TPMEFVRE-PVGTGPYKLTDWTPGQQIVLSARDDYW-GEKPEVTEATYLFRADPAVRAAM 226

Query: 237 IVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFR 296
           +   E D +    P I +T  A NP   + Y  + T    ++         E L++V  R
Sbjct: 227 VQTGEADLS----PSISQT-EATNPATDFSYLDSETVYLRIDH------NIEPLNDVRIR 275

Query: 297 RAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKL 356
           RA ++A+DR+  +       GT+   ++ L  A         +   K F  YD E +KKL
Sbjct: 276 RALNLAIDREAFL-------GTLVPDSAVLATAIVPPPTLGWNPDVKVF-PYDPEQAKKL 327

Query: 357 LAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPE 416
           + +A    V     V+TP       +I     + +    ++    QLQEVG+K + +  E
Sbjct: 328 IEEAKADGVK----VDTPI-----TIIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVE 378

Query: 417 FAVYNQAMLEGTYDVAYTNYF-HGADPFTYWNSGYNSALQSGDGMPRFAMHY-------- 467
            A          ++V Y+  F  G  P        NS      G P F+M +        
Sbjct: 379 VA---------EHEVYYSKPFKEGRGPQLVAAMHDNS-----KGDPSFSMFFKYDSEGTQ 424

Query: 468 --FTDKKLDGLL 477
             F+D K+D L+
Sbjct: 425 SGFSDPKVDDLI 436