Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., ABC transporter, extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 83.6 bits (205), Expect = 2e-20
 Identities = 114/460 (24%), Positives = 191/460 (41%), Gaps = 56/460 (12%)

Query: 57  TDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYS 116
           T +I++ LV   +  GN+ V  LA ++  + D +S   ++++  KW DG   TADDV ++
Sbjct: 74  TSYIFDTLVS-QDADGNS-VPGLARTWTRSQDGLSYALELQRDAKWHDGTPVTADDVAFT 131

Query: 117 FGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSN-VPYEISLIPIVAEHVWKDV 175
              +   P +   G  K +  VE    + +R  +  A    V    S IPI+  H+++ V
Sbjct: 132 LRYMAEHPYV--FGSVKALAGVEIEGVHDLRIHIKRAEYGLVEGLFSAIPILPRHIYEGV 189

Query: 176 KDPTTF-TNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLL 234
           KDP  F T E  VG+GP+ +      Q   +              D + + ++   D  L
Sbjct: 190 KDPFRFATPEAAVGSGPYRLAAYDKAQGRYRLEATEDHPLGRPRFDQIWIVKM-GPDAAL 248

Query: 235 GKIVNSELDWTSSFVPD-----IDRTYAA-ANPNHHYWYPAAGTQAFMVNFKNPDPAKKE 288
             +   E+D  S   PD     +D  +A   +P+ H            + F +    +K 
Sbjct: 249 QAMSAGEVDVISYLPPDRLPEALDAGFAVETSPSDH---------VLRLGFNHRGQFQK- 298

Query: 289 ALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAW-SDEATHKKYKGFNT 347
               ++ R+A + A+DR  +++IAF G   + +  +G       W SDEAT    +G+  
Sbjct: 299 ----IELRQAIAYAVDRFALLEIAFPGVAELAE--TGYFQPGSKWQSDEAT----EGY-A 347

Query: 348 YDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVG 407
           YD   ++ LL  AG+   N  G  +T  G+   L + +           ++  EQL+  G
Sbjct: 348 YDPAQARDLLLAAGWTQ-NRAGRWQT-QGEEIRLRLLTDGREV---KPARVIAEQLEAFG 402

Query: 408 IKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFT----YWNSGYNSALQSGDGMPRF 463
                R  E A     + +G YD+   +     DP       +  G+NS     D  P  
Sbjct: 403 FAVDLRVMEVAALRSLVADGDYDLTLFSSSTLGDPGNIRRRVFGRGWNS-----DRFP-- 455

Query: 464 AMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAEN 503
                 D K+ GL+ +      + E+  I    Q + AEN
Sbjct: 456 -----ADPKMAGLIKAQAVAQGQAERQEILARFQHLYAEN 490