Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  107 bits (267), Expect = 1e-27
 Identities = 139/564 (24%), Positives = 226/564 (40%), Gaps = 114/564 (20%)

Query: 7   KTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATN---LRTTTDFIYEP 63
           KT LA A+ A   + SA A     L    +  P    +FNP +A++      ++  +Y  
Sbjct: 5   KTLLALALSALFPAASAWAAGNDTLVYCSEASP---ESFNPQIASSGPSFVASSQVLYNR 61

Query: 64  LVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAF------TADDVVYSF 117
           L+ F+ +K NTP+  LA  + ++ D  + TF +RKGV+++  + F       ADDV++S 
Sbjct: 62  LINFDPVK-NTPIPSLATEWSVSPDGKTWTFTLRKGVQFNSNKFFKPTRDFNADDVLFS- 119

Query: 118 GLLKAKPE--------------LDQRGINKWVTSVEKVDEYKVRFRLSEANS------NV 157
            +L+ K                    G++K +  V+K+D+Y V+F LSE N+       +
Sbjct: 120 -VLRQKDANHPYHNVSQGHYEYFHDVGLDKLIKEVKKLDDYHVQFVLSEPNAAFLADWGM 178

Query: 158 PYEISLIPIVAEHVWKDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANL 217
            +   L    A+ + K  K    + +  PVGTGP+ +             NP+YWD    
Sbjct: 179 DFASILSSEYADAMLK--KGTPEYVDTWPVGTGPYALQQYKADSQIRYIANPHYWD---- 232

Query: 218 EVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMV 277
                            G++    L +  S  P+++   A    N     PA     F V
Sbjct: 233 -----------------GEVPTKHLIF--SITPNVETRLAKLQTNECQIIPAPSPVQFPV 273

Query: 278 NFKNPDPA----------------KKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVND 321
              N D A                +K+  DNV  R+A + A D+Q I+   F  SG+V  
Sbjct: 274 IKGNKDLALHSVEALNVGYLAFNTEKKPFDNVLVRQALNYATDKQAIVKAVFLDSGSVAK 333

Query: 322 F---ASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKS 378
               A+ LGY           KK      YD + +K LL +AG +             K 
Sbjct: 334 SPIPANMLGY-----------KKDLPDYDYDPQKAKDLLKQAGLE-------------KG 369

Query: 379 FELLIQSPNGWTDFNNTVQLAVEQLQ----EVGIKAKARTPEFAVYNQAMLEGTYDVAYT 434
            E+ + S      +N   +   E +Q    +VGIKAK  T E+  Y   M +G +D A  
Sbjct: 370 AEVTLWSMPVQRPYNPNSRRIAEMIQNDWSKVGIKAKIVTYEWGEYLAGMRKGEHDSALF 429

Query: 435 NYF-HGADPFTYWNSGYN-SALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAI 492
            +     DP  +  +  +   +++G  + R+      DK  D L+      +D   +  +
Sbjct: 430 GWMSDNGDPDNFAGTLLSCDNIKTGSNVARWC-----DKSYDALVKKAILVSDPQARAKL 484

Query: 493 AHGIQKIIAENQVTIPVMSGAWMY 516
               Q I  +    I + +G   Y
Sbjct: 485 YGEAQTIFQQQAPWITLATGKTFY 508