Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., Periplasmic dipeptide transport protein from Enterobacter sp. TBS_079

 Score =  112 bits (279), Expect = 5e-29
 Identities = 138/564 (24%), Positives = 230/564 (40%), Gaps = 114/564 (20%)

Query: 7   KTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATN---LRTTTDFIYEP 63
           KT LA A+     + +A A     +    +  P    +FNP +A++      ++  +Y  
Sbjct: 5   KTLLALALSTLLPAGAAWAANNDTIIYCSEASP---ESFNPQIASSGPSFVASSQVLYNR 61

Query: 64  LVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGE------AFTADDVVYSF 117
           L+ F+ +K NTPV  LAES+ ++ D  + TF +RKGVK++  +       F ADDV++S 
Sbjct: 62  LINFDPVK-NTPVPSLAESWTISPDGKTYTFTLRKGVKFNSNKYFKPTRDFNADDVIFSV 120

Query: 118 GLLKAKPE-------------LDQRGINKWVTSVEKVDEYKVRFRLSEANSN--VPYEIS 162
            + +  P+              +  G++K +  V+KVD+Y V+F LSE N+     + + 
Sbjct: 121 -MRQKDPKHPYHNVSQGNYEYFNDVGLDKLIQDVKKVDDYHVQFTLSEPNAAFLADWGMD 179

Query: 163 LIPIV-AEHVWKDVKDPTTFTNEN-PVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVD 220
              I+ AE+    +K  T    +  P+GTGP+ +       L     NPNYW+       
Sbjct: 180 FASILSAEYADAMLKKGTPENVDTWPIGTGPYVLQQYKVDSLIRYVANPNYWE------- 232

Query: 221 CLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFK 280
                         G +    L +  S  P+++   A    N     PA     F V  K
Sbjct: 233 --------------GAVPTKHLIF--SITPNVETRLAKLQTNECQIIPAPSPVQFDVINK 276

Query: 281 NPD----------------PAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFAS 324
           N D                  +K+  DNV  R+A + A D++ I++  F GSGTV     
Sbjct: 277 NKDLKLHAVEALNVGYLAFNTEKKPFDNVLVRQALNYATDKKAIVNAVFMGSGTV----- 331

Query: 325 GLGYAFEAWSDEATHKKYKGFN------TYDVEGSKKLLAKAGFKDVNGDGFVETPSGKS 378
                    +         GFN      +YD E +K LL +AG +             K 
Sbjct: 332 ---------AKSPIPPNMLGFNNDLKDYSYDPEKAKALLKQAGLE-------------KG 369

Query: 379 FELLIQSPNGWTDFNNTVQLAVEQLQ----EVGIKAKARTPEFAVYNQAMLEGTYDVAYT 434
            ++ + S      +N   +   E +Q    +VG+KAK  + E+  Y   M +G +D A  
Sbjct: 370 ADVTLWSMPVQRPYNPNSKRIAEMIQSDWAKVGVKAKIVSYEWGEYLSGMRKGEHDSALF 429

Query: 435 NYF-HGADPFTYWNSGYN-SALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAI 492
            +     DP  + +      ++++G    R+      DK  D L+     T++  E+  +
Sbjct: 430 GWMSDNGDPDNFADVLLGCDSIKTGSNAARWC-----DKGYDDLVKKAKLTSNPGERAKL 484

Query: 493 AHGIQKIIAENQVTIPVMSGAWMY 516
               Q+I       I + +G   Y
Sbjct: 485 YSQAQEIFYAQAPWIALANGKTFY 508