Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., Periplasmic dipeptide transport protein from Enterobacter sp. TBS_079

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 131/553 (23%), Positives = 224/553 (40%), Gaps = 79/553 (14%)

Query: 1   MLANIKKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDF- 59
           M  ++KK+ +    ++      A +     L    +  P     FNP L T+  TT D  
Sbjct: 1   MSISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSP---EGFNPQLFTS-GTTYDAS 56

Query: 60  ---IYEPLVVFNEMKGNTPVFR-LAESYKMADDLMSVTFDIRKGVKWSDGEA------FT 109
              IY  LV F    G T V   LAE + +++D  + TF +R+GVKW D +       F 
Sbjct: 57  SVPIYNRLVEFKT--GTTEVIPGLAEKWDVSEDGKTYTFHLRQGVKWQDNKEFKPTRDFN 114

Query: 110 ADDVVYSFGLLK------------AKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNV 157
           ADDVV+SF   K            +    +  G+   +  V+KVD+  V+F L+   +  
Sbjct: 115 ADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLQDLIAEVKKVDDKTVQFVLTRPEA-- 172

Query: 158 PYEISLIPIVAEHVWKDVKD------PTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNY 211
           P+   L    A  + K+  D           + NP+GTGPF ++        +    P +
Sbjct: 173 PFLADLAMDFASILSKEYADNMLKAGTPEKVDLNPIGTGPFQLLQYQKDSRILYKAFPGF 232

Query: 212 WDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVP-DIDRTYAAANPNHHYWYPAA 270
           W     ++D L      +      K+  +E        P DI R     N N       A
Sbjct: 233 W-GTKPQIDRLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKNIN---LLEQA 288

Query: 271 GTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAF 330
           G     ++F      +K+  D+V  R+A + A++++ II   + G+G     A  L    
Sbjct: 289 GLNVGYLSFN----TEKKPFDDVKVRQALTYAVNKEAIIKAVYQGAGVA---AKNL-IPP 340

Query: 331 EAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWT 390
             W      K Y    TYD E +K LL +AG       GF    + + + + +Q P    
Sbjct: 341 TMWGYNDDVKDY----TYDPEKAKALLKEAG----QEKGF----TVELWAMPVQRP---- 384

Query: 391 DFNNTVQLAVEQLQ----EVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYF-HGADPFTY 445
            +N   +   E +Q    +VG++AK  T E+  Y +    G +      +     DP  +
Sbjct: 385 -YNPNARRMAEMVQADWAKVGVQAKIVTYEWGEYLKRAKAGEHQAVMMGWTGDNGDPDNF 443

Query: 446 WNSGYN-SALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQ 504
           + + ++ +A + G    R+    F D     L+     T D N+++ +    Q ++  +Q
Sbjct: 444 FATLFSCAAAKDGSNYSRWCYKPFED-----LIQPARATDDHNKRIELYKQAQ-VVMHDQ 497

Query: 505 VTIPVMSGAWMYQ 517
               +++ + +Y+
Sbjct: 498 APALIVAHSTVYE 510